Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0082 ATGTACTTGTCCGATAAGCCTCGCCCAATCGATATTTACAAGGAAGAAGGTACCAGAGATATGATGATCGAGGTTGCCTCTAATGGCGACCACCATATTCAGCCTCATCAGCACCAGCCACAGCAGACTCATCAGCAGCACCAAATGATGCTCGGCGATAGCAGTGGTGAGGATCATGAAGTCAAGGCGCCGAAGAAGCGAGCGGAGACTTGGGTTCAGGATGAGACTCGAAGCTTAATTGGTCTACGACGGGATATGGATGGCTTGTTCAATACCTCGAAATCGAACAAGCATTTGTGGGAGCAGATTTCGTCTAAGATGAGGGAAAGGGGCTTTGATCGCTCTCCGACTATGTGTACTGATAAGTGGAGGAACTTGCTTAAGGAGTTCAAGAAGGCTAAGCACCATGACAGGGGAAGTGGCTCTGCTAAGATGTCGTATTACAAAGAGATTGAAGAGATTTTGAAGGAGAGAAGCAAAAGTGGGCAGTACAAGAGCCCCACGCCACCCAAGATTGATTCATATATTCAATTCTCAGACAAAGGAATTGAGGATAATGGTCTATCGTTCGGACCTGTTGAAGCTGGTGGCAGGCCCTCACTTAATCTTGAAAGACAGCTAGATCACGATGGTCATCCCCTTGCCATCACAGCAGCTGATGCAGTTGCTGCAACGGGCATTCCACCTTGGAATTGGAGAGAGGCACCTGGAAATGGTGGGGAGGGTCAGGCATTTGGTGGAAGAGTTATATCAGTCAAGTGGGGAGACTACACGAGAAGAATCGGCGTTGACGGCACCTCAGATGCCATCAAGGAGGCAATCAAGTCTGCATTTAGGTTGAGAACTAAACGTGCATTTTGGTTAGAGGATGAGGATCAGGTTGTCAGAAGTCTGGACAGGGACATGCCTATAGGAAACTACACTCTTCATCTTGATGAAGGGGTGGCTGTTAAAATCTGTCTCTATGATGAATCTGACCACTTACCAGTACATACTGAAGAAAAAGTATTTTACATTGAAGATGATTACCGAGATTTTTTAGCTCGTCGGGGCTGGACAGGCCTTCGAGAGTTTGATGGGTATAGAAACATCGATAATATGGATGATCTCCGTCCTGGTGCAATATACCGCGGTGTAAGTTGA 1143 46.89 MYLSDKPRPIDIYKEEGTRDMMIEVASNGDHHIQPHQHQPQQTHQQHQMMLGDSSGEDHEVKAPKKRAETWVQDETRSLIGLRRDMDGLFNTSKSNKHLWEQISSKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGSGSAKMSYYKEIEEILKERSKSGQYKSPTPPKIDSYIQFSDKGIEDNGLSFGPVEAGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREAPGNGGEGQAFGGRVISVKWGDYTRRIGVDGTSDAIKEAIKSAFRLRTKRAFWLEDEDQVVRSLDRDMPIGNYTLHLDEGVAVKICLYDESDHLPVHTEEKVFYIEDDYRDFLARRGWTGLREFDGYRNIDNMDDLRPGAIYRGVS 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 777614 783566 + Hsped.10g00820.1 Hepe10g0082 580629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0082 380 SMART sant 67 129 IPR001005 -
Hepe10g0082 380 FunFam trihelix transcription factor GT-1 71 133 - -
Hepe10g0082 380 ProSiteProfiles Myb-like domain profile. 63 127 IPR001005 -
Hepe10g0082 380 Gene3D - 71 133 - -
Hepe10g0082 380 Pfam Myb/SANT-like DNA-binding domain 70 154 IPR044822 -
Hepe10g0082 380 CDD GT1 69 134 - -
Hepe10g0082 380 PANTHER FI21293P1 37 372 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g0082 Hepe-Chr10:777614 Hepe10g1967 Hepe-Chr10:56649725 2.07e-09 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56426 PF13837 Myb_DNA-bind_4 7.20E-21 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0082 - - - 0.0