Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0088 ATGGCGGCTGGGCGACATGGGGGTTACCGTGAGAACGAGTTCAGGGACCGGGAGACCAATTTTCATGTGTCGAGGAGGTCGTTTGGCAGTGCCAGGCAAGAATTTGAAAGAGTTAAGATTAGCGATGATGATCGCGGTGTTCGTCGGAGTTTAGGGCGGGACGTCAGAGATAAGGTTAGGGTTAGGCACCAGGATATGAAGGAGAGCGCGATTGTTAATGGTTATTATCATTCGTCTTCTAGCAAGAGCAATTCGGGTAATAGTGATGGTAGCAGTGATCATGGCCCGATGCGTAATAGGGTTTCTAGTACCATCGATAGGGAGCCCGGTGAGTTATCCAGTGAGAGTGGATCTGATGATTCCATTGAATCTTGCTTGGGGGTCAAAGATAGCGAGGTTTTGAAAGTGGTAGAAAATTGGAATCTATCTCCTATGGAGAGGAAGAGAAAATTTGCGCCTATAGTTTGGGATAGGGACGACAACAAATTGAGTAATCTATCCCGAAATAGGACTGTCACAACAGTGATGGGTCTTCCGCGGCCCGAAAATCCAACTCGCCAGTCTCCCGATATCATCTCAGACCGAGGTGAGGATACATCTTCAGTTAGGAATAGTGATAACGAAAATTTTCCATCTTCTTCTGAATTTAAATCTCCTTTAGTCTCTGAATATGAAATGTCCGAGTCATTAGGGTCTCCTGTTTTAGGAAAGCATTTACACCAGAATGTAGAAGTAGAACTGTTAGATAATGAAGATAACGGCCCAACAAGGAATATCTCATTTTCACGGTGGGCTGGTGGAAATACTTCTCCAGTTGATGAAGGTGGGATTTTAGATGATAAACAAGTACTAAGACAAAAGAAAATACCAATTACTGAAAATCGGGCAACTGAGGTTCATCACAAAACCTCGAGCGATACATTTTCCGAGGATGGGGACCTTAAGAACAATGGTTTCAAGTTCAATGGAATAAGAGCGAGGTCATCTGAATCTAGTGAACTAGGTGCGACTACCCATTTTAAATTTTCAAGTGTGGGTGAGTATCCCGGTGACGATGTGGAGAAGGGTGGCTACATGGAGGTTGATGAGGGACATGATATTAGTGATGCTAGTTTCAGTCTGTCCGATACTGATTCTGATGATGACGATGACATTTGTTCGACACACGAGCCTCCAGCACCCACTCAACGAAGTGTTAACATGCTTCAGGGATGTAGAAGTGTTGATGAATTTGAGAGACTAAACAAGATCGACGAAGGCACCTATGGTGTTGTGTATAGAGCCAAAGACAAGAAGACTGGGGAAATTGTGGCCTTGAAGAAGGTAAAAATGGAGAAGGAGCGGGAAGGGTTCCCGCTGACTGCTTTGAGGGAAATAAATATTCTTCTTTCATTCCATCACCCATCAATTGTTGACGTGAAGGAAGTTGTGGTGGGGAGTAGTCTTGATAGCATTTTTATGGCGATGGAATACATGGAGCACGATCTGAAAGGACTCATGGAGACCATGAAACATCCTTTTAGTCAGAGTGAAGTAAAATGCCTAATGATTCAGCTATTGGAGGGTGCTAGGTATCTCCATAGTAACTGGGTGCTTCATAGGGATTTAAAGACATCTAATTTGCTTTTGAACAACCAGGGTGAATTGAAGATCTGTGACTTTGGATTGGCTCGTCAATATGGAAGTCCTTTGAAGCCATATACACATTTAGTTGTTACTCTTTGGTACAGGGCACCTGAACTTCTGTTGGGAGCGAGACAGTATTCAACAGCAATTGATATGTGGTCCTTGGGCTGTATCATGGCTGAACTTTTATCCAAGGAACCTCTTTTTAATGGGAAAACTGAAGTTGACCAACTTGATAAGATTTTTAGAACTCTAGGCACTCCAAATGAGACTATTTGGCCTGGATTCTCCAAGCTACCTGGTGTTAGAGTCAATTTTGTCAAGCATCCGTAA 1959 43.39 MAAGRHGGYRENEFRDRETNFHVSRRSFGSARQEFERVKISDDDRGVRRSLGRDVRDKVRVRHQDMKESAIVNGYYHSSSSKSNSGNSDGSSDHGPMRNRVSSTIDREPGELSSESGSDDSIESCLGVKDSEVLKVVENWNLSPMERKRKFAPIVWDRDDNKLSNLSRNRTVTTVMGLPRPENPTRQSPDIISDRGEDTSSVRNSDNENFPSSSEFKSPLVSEYEMSESLGSPVLGKHLHQNVEVELLDNEDNGPTRNISFSRWAGGNTSPVDEGGILDDKQVLRQKKIPITENRATEVHHKTSSDTFSEDGDLKNNGFKFNGIRARSSESSELGATTHFKFSSVGEYPGDDVEKGGYMEVDEGHDISDASFSLSDTDSDDDDDICSTHEPPAPTQRSVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTALREINILLSFHHPSIVDVKEVVVGSSLDSIFMAMEYMEHDLKGLMETMKHPFSQSEVKCLMIQLLEGARYLHSNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEVDQLDKIFRTLGTPNETIWPGFSKLPGVRVNFVKHP 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 838454 842825 + Hsped.10g00880.1 Hepe10g0088 580635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0088 652 SMART serkin_6 411 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0088 652 PANTHER CELL DIVISION PROTEIN KINASE 410 644 IPR050108 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0007346(PANTHER)
Hepe10g0088 652 MobiDBLite consensus disorder prediction 175 190 - -
Hepe10g0088 652 MobiDBLite consensus disorder prediction 175 218 - -
Hepe10g0088 652 MobiDBLite consensus disorder prediction 40 67 - -
Hepe10g0088 652 FunFam cyclin-dependent kinase G-2 isoform X1 396 493 - -
Hepe10g0088 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0088 652 MobiDBLite consensus disorder prediction 73 99 - -
Hepe10g0088 652 Gene3D Transferase(Phosphotransferase) domain 1 494 651 - -
Hepe10g0088 652 Pfam Protein kinase domain 411 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0088 652 MobiDBLite consensus disorder prediction 106 121 - -
Hepe10g0088 652 MobiDBLite consensus disorder prediction 40 124 - -
Hepe10g0088 652 Gene3D Phosphorylase Kinase; domain 1 395 493 - -
Hepe10g0088 652 MobiDBLite consensus disorder prediction 1 20 - -
Hepe10g0088 652 SUPERFAMILY Protein kinase-like (PK-like) 403 646 IPR011009 -
Hepe10g0088 652 MobiDBLite consensus disorder prediction 203 218 - -
Hepe10g0088 652 FunFam Mitogen-activated protein kinase 492 636 - -
Hepe10g0088 652 CDD STKc_CDC2L1 405 652 IPR045267 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0088 652 MobiDBLite consensus disorder prediction 368 397 - -
Hepe10g0088 652 ProSiteProfiles Protein kinase domain profile. 411 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0370 Hepe-Chr9:3288488 Hepe10g0088 Hepe-Chr10:838454 9.49e-58 dispersed
Hepe10g0088 Hepe-Chr10:838454 Hepe10g0613 Hepe-Chr10:7570656 4.18e-45 dispersed
Hepe10g0088 Hepe-Chr10:838454 Hepe10g1534 Hepe-Chr10:52091184 4.55e-242 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73158 PF00069 Pkinase 1.80E-64 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0088 K08818 - csv:101221702 1018.45