Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0096 ATGGATATCAGTGAGGTTGAAGAAAATCTATTTGCTGCAAGTGATGCCAAGCTCCATAGAGGAATGTGCAAGACTCTTTCTGCATTATATTGTAAAGTATTATCAATTTTCCCTTCATTGGAAGCTGCACGACCTCGGAGCAAATCTGGTATCCAGGCATTATGTTCATTGCATGTAGCACTTGAAAAAGCCAAGAATACTCTCCAACATTGTACAGAGAGCAGCAAACTTTACTTGGCTATAACTGGGGACTCTGTCCTGTTAAAGTTTGAGAAGGTAAAAAAGGCTCTACAAGATAGTCTTAAACGTGTTGAAGATATTGTTCCACAGTTAATTGGCTATCAGGTTCAGGAGATTCTGGAGGAACTGGGGAGTACTCAATTTTTCCTAGATCCTTTGGAGAAGCAAGTTGGTGAGGACATTATTTTATTGCTCCAACAGGGACGAACATTTAACAACACTGTTGACAACAATGAGCTTGAGGCTTTTCACCAAGCTGCTATTAAACTTGGAATAAACTCCTCAAGAACAGTTCTTGCAGAGAGAAGAGCACTAAAGAAACTAATCGATCGGTCGCGCAATGAAGATGACAAGAGGAAGGAATCAATTGTAGCATATCTTTTGCATCTCATGAGGAAGTACTCCAAGTTATTTAGAAGCGAGGTACCAGATGACAATGATTCACAGGGTTCTGGACCTTGTTCACCCACTCTTCAAAGCTCTCTCGAGGACAGTGGTCAAGTCTTTGAAAGGCAGCTAACAAAGATTGGTTCGTTTACTTTGAAGCCAAAAATTCGCAGATTCGAGCCGATTCCCCTTCCACCCGATGAATTGAGGTGTCCTATATCATTGCAGCTTATGTATGATCCAGTCATAATTGCTTCTGGTCAAACATATGAAAGGGTTTGCATTGAGAAGTGGTTAAGTGATGGCCACAACACCTGCCCAAAAACTCAACAGAAACTCTCTCATCTTTCATTGACACCGAATTACTGTGTTAAGGGCCTGATTGCAAACTGGTGCGAACAGTATGGAGTTTCTATTCCGGACGGGCCTCCAGATAGTCTTGACCTCAATTACTGGAGGCTCGCGTTATCTGAATCAGAGTCTCAAAATTTGTCACCTGCAGACACTGTTTGTTCTTGTAAACTGAAAGATGTTAAAGTTGTCCCGCTAGAAGAAAATGTTATAACTGAGGAGATCAAAGGAAATGTAGTGTATGATAACTCTGCTGAAGACCAAGAGTCCGACATAAATGTGCCTTCTAGATACGAACAGTATTTGAAAGTCTTGAACGAAGAAGCTGACTTGAGGAAAAAGTCCGCGGTCGTGGAGCAAATAAGACTGTTGCTCAAGGATGACGAAGAAGCGAGGATTTTTATGGGAGCTAATGGATTTGTACAGGGACTTCTACGCTACTTAGGGATAGCTGTGAAAGAACAAAATGCCAAGGCTCAGGAAAATGGAGCAATGGCTCTTTTCAATCTTGCTGTCAACAATGATAGGAACAAGGAAATAATGCTGGCAGAAGGGGTGATTTCATTGTTGGAGGAAATGATTATGAACCAAAATTCCGAGGGATATGCAACGGCCCTCTATCTTAATGTCTCCTGTCTCGAAGAAGCGAAATCTATTATCGGCTCAAGTTGTGCGGTCCCGTTCTTGACTCAACTTCTCAACGCTAATACCGAATCAATATGCAAGCTCGATGCCCTTCACACACTTTACAATCTCTCTACTGTGCCCTCCAACATTCCCAACCTGGTTTCTTCTGGAATAATCAGGGGACTTCAATCCCTTCTTTCAGCCTCTCTTGATCGAACATGGACCGAAAAGTGCATCGCTATCTTGATAAATTTGGCTTCAAGCGAATCAGGTCGAGATCAAATGTCATCTACTCCAGAACTGATCAGTGGGTTGGCAACAATATTAGACAATGGTGAACCCATTGAGCAGGAACAAGCAGTGTCTTGTCTCTTGAGTGTGTGCATTGGGAATGAGAAGTGCAGTGAGATGGTCCTACAGGAAGGCGTAATTCCCGGGCTGGTGTCGATGTCTGTGAATGGGACGGCGAGAGGCAAGGAGAAGGCTCAAAAGCTTCTGATGTTGTTCAGGGAGCAACGACAACAGGAGCCACCGCCACCGACACCGAAACCGATAATGATACCGACTCGGATGCTGACCGATCGATCAGAGAGTAGCGGGACATCCGTGCCTGTGGCAGAATCAAAGCCACTGTGCAAGTCAATTTCAAGAAGAAAAACAAGCAAAGCTCTTAGCTTTTTATGGAAAAGCAAAAGCTATTCAGTGTACCAATGCTAA 2322 43.28 MDISEVEENLFAASDAKLHRGMCKTLSALYCKVLSIFPSLEAARPRSKSGIQALCSLHVALEKAKNTLQHCTESSKLYLAITGDSVLLKFEKVKKALQDSLKRVEDIVPQLIGYQVQEILEELGSTQFFLDPLEKQVGEDIILLLQQGRTFNNTVDNNELEAFHQAAIKLGINSSRTVLAERRALKKLIDRSRNEDDKRKESIVAYLLHLMRKYSKLFRSEVPDDNDSQGSGPCSPTLQSSLEDSGQVFERQLTKIGSFTLKPKIRRFEPIPLPPDELRCPISLQLMYDPVIIASGQTYERVCIEKWLSDGHNTCPKTQQKLSHLSLTPNYCVKGLIANWCEQYGVSIPDGPPDSLDLNYWRLALSESESQNLSPADTVCSCKLKDVKVVPLEENVITEEIKGNVVYDNSAEDQESDINVPSRYEQYLKVLNEEADLRKKSAVVEQIRLLLKDDEEARIFMGANGFVQGLLRYLGIAVKEQNAKAQENGAMALFNLAVNNDRNKEIMLAEGVISLLEEMIMNQNSEGYATALYLNVSCLEEAKSIIGSSCAVPFLTQLLNANTESICKLDALHTLYNLSTVPSNIPNLVSSGIIRGLQSLLSASLDRTWTEKCIAILINLASSESGRDQMSSTPELISGLATILDNGEPIEQEQAVSCLLSVCIGNEKCSEMVLQEGVIPGLVSMSVNGTARGKEKAQKLLMLFREQRQQEPPPPTPKPIMIPTRMLTDRSESSGTSVPVAESKPLCKSISRRKTSKALSFLWKSKSYSVYQC 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 891512 896948 - Hsped.10g00960.1 Hepe10g0096 580643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0096 773 Gene3D - 409 711 IPR011989 -
Hepe10g0096 773 SUPERFAMILY ARM repeat 425 696 IPR016024 -
Hepe10g0096 773 FunFam RING-type E3 ubiquitin transferase 273 347 - -
Hepe10g0096 773 PANTHER U BOX DOMAIN-CONTAINING 21 708 - -
Hepe10g0096 773 SUPERFAMILY RING/U-box 274 350 - -
Hepe10g0096 773 SMART Ubox_2 277 340 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe10g0096 773 ProSiteProfiles U-box domain profile. 273 347 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe10g0096 773 Pfam U-box domain 275 343 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe10g0096 773 CDD RING-Ubox_PUB 275 327 IPR045210 -
Hepe10g0096 773 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 347 IPR013083 -
Hepe10g0096 773 Gene3D - 8 105 IPR036537 GO:0007166(InterPro)
Hepe10g0096 773 MobiDBLite consensus disorder prediction 221 241 - -
Hepe10g0096 773 MobiDBLite consensus disorder prediction 224 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0796 Hepe-Chr8:7142474 Hepe10g0096 Hepe-Chr10:891512 8.52e-31 dispersed
Hepe08g1171 Hepe-Chr8:11975833 Hepe10g0096 Hepe-Chr10:891512 1.48e-23 dispersed
Hepe10g0096 Hepe-Chr10:891512 Hepe10g1222 Hepe-Chr10:47330852 1.08e-34 dispersed
Hepe02g2382 Hepe-Chr2:68981963 Hepe10g0096 Hepe-Chr10:891512 3.47e-11 transposed
Hepe07g0724 Hepe-Chr7:8676762 Hepe10g0096 Hepe-Chr10:891512 1.68e-88 transposed
Hepe10g0096 Hepe-Chr10:891512 Hepe10g1529 Hepe-Chr10:52040942 1.34e-277 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0096 - - - 0.0