Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0104 ATGGCGGAAGAAGAATCCGGAGAGGCTATCCGGCCGGAATTTCCGGCGGGACGAGTGAAGAAGATAATGAAAGTGGACAAGGACGTCGGCAAAGTGAACTCAGAAGCCCTATTTATCGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAGAAATCTGCAGAAGTCGCCGCCGAGAAGAAACGGAAGACCGTGAAGCTTGTAGACATTCGAATCGCCGTCAAAAGGCATCGATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCATCTCAGCCGTCGGATGCTCCACCGAAGGACGAGAATCGCACTCGCGCTGTCGTTGATAAAGCGGCGGCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGTCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCATAA 426 53.29 MAEEESGEAIRPEFPAGRVKKIMKVDKDVGKVNSEALFIVSCATELFLKLLAEKSAEVAAEKKRKTVKLVDIRIAVKRHRSISDFLLDSLPLPSQPSDAPPKDENRTRAVVDKAAAPEGTRRIDDFFRRSAKTTSAETNES 141
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1007067 1010014 - Hsped.10g01040.1 Hepe10g0104 580651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0104 141 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982(InterPro)
Hepe10g0104 141 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 11 109 IPR050568 GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)
Hepe10g0104 141 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Hepe10g0104 141 SUPERFAMILY Histone-fold 12 91 IPR009072 GO:0046982(InterPro)
Hepe10g0104 141 MobiDBLite consensus disorder prediction 101 131 - -
Hepe10g0104 141 MobiDBLite consensus disorder prediction 90 141 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56427 PF00808 CBFD_NFYB_HMF 3.40E-18 CL0012 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0104 - - - 0.0