Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0116 ATGATTCCCTCAACCATGGCGCAATCACGTGGATTCTTTGAGATTCGGAGAGCAAGCCGATTAATGAGGGATGTCATTCGAAAAATGAGAAATGGCCCATTCCGGTTCTTGATAAGCTCAGGCGGTTTGATGGTTGAGTCTGATTGTCTGCAGATAATCAAACTCATCAAAGAAGAGGCTGAAGATCCCGAGCTGGTAAAAACGTCAATCAATTTGTCATCGAGCTCAATTTTAATGGACGACGGAGGAGTTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTTTACCACCGCCGCAGCATGACCCGGCGGCGCACCAGCACCAGCCGCCGCAGATTGGGATGGAGAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTCATTCAGTACAACATCTTTGGTAACATCTTTGAAGTTACAGCCAAGTACAAACCTCCCATCATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCTGCTCTCAACTCTGAGACAAACGAGCATGTGGCGATCAAGAAGATTGCTAATGCGTTTGACAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTTCTTCGGCATATGGATCATGAAAACGTTGTTGCAATTAGGGACATCATACCTCCGCCTCTAAGGGGAACATTTAATGATGTTTATATAGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGTACTTCCTGTACCAGATTCTCCGTGGATTGAAGTACATACATTCAGCAAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTACTATTAAATGCCAACTGTGACCTGAAAATATGCGATTTTGGACTTGCTCGTGTTACTTCTGAAACTGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGTGCACCAGAGCTCCTACTTAATTCATCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCCTTGTTTCCTGGTCGAGATCATGTGCATCAGTTACGCTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCTGATCTTGTTTTTTTGAACGAGAATGCTAAAAGATACATACGGCAACTTCCTCAATACCATCGGCAGTCATTCATTGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGACAGAGACTTACCGTTGAAGATGCTCTAGCTCATCCGTATTTGACTTCATTGCATGACATTAGTGATGAGCCTGTTTGCACGACGCCCTTCAGCTTCGATTTCGAGCAGCATGCGCTTACCGAAGAACAGATGAAAGAGCTGATCTTTCGAGAGGCACTTGCATTTAACCCCGAGTATCATCAACAATAA 1443 44.84 MIPSTMAQSRGFFEIRRASRLMRDVIRKMRNGPFRFLISSGGLMVESDCLQIIKLIKEEAEDPELVKTSINLSSSSILMDDGGVSQPDDTVMSEAASLPPPQHDPAAHQHQPPQIGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRGTFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLVFLNENAKRYIRQLPQYHRQSFIEKFPHVHPAAIDLVEKMLTFDPGQRLTVEDALAHPYLTSLHDISDEPVCTTPFSFDFEQHALTEEQMKELIFREALAFNPEYHQQ 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1147313 1156070 + Hsped.10g01160.1 Hepe10g0116 580663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0116 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0116 480 ProSiteProfiles Protein kinase domain profile. 147 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0116 480 Pfam Protein kinase domain 152 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0116 480 FunFam Mitogen-activated protein kinase 132 241 - -
Hepe10g0116 480 CDD STKc_TEY_MAPK 140 475 - -
Hepe10g0116 480 ProSitePatterns MAP kinase signature. 182 285 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0116 480 Gene3D Transferase(Phosphotransferase) domain 1 231 459 - -
Hepe10g0116 480 MobiDBLite consensus disorder prediction 83 111 - -
Hepe10g0116 480 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 140 470 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Hepe10g0116 480 Gene3D Phosphorylase Kinase; domain 1 130 469 - -
Hepe10g0116 480 ProSitePatterns Protein kinases ATP-binding region signature. 153 177 IPR017441 GO:0005524(InterPro)
Hepe10g0116 480 SUPERFAMILY Protein kinase-like (PK-like) 152 440 IPR011009 -
Hepe10g0116 480 FunFam Mitogen-activated protein kinase 231 459 - -
Hepe10g0116 480 SMART serkin_6 147 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0706 Hepe-Chr7:8449842 Hepe10g0116 Hepe-Chr10:1147313 1.66e-138 dispersed
Hepe09g0380 Hepe-Chr9:3381297 Hepe10g0116 Hepe-Chr10:1147313 2.03e-106 dispersed
Hepe10g0116 Hepe-Chr10:1147313 Hepe10g1137 Hepe-Chr10:45175894 2.42e-189 dispersed
Hepe10g0116 Hepe-Chr10:1147313 Hepe10g1145 Hepe-Chr10:45365074 9.21e-205 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73159 PF00069 Pkinase 4.30E-73 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0116 K14512 - csv:101204301 785.023