Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g0116 | ATGATTCCCTCAACCATGGCGCAATCACGTGGATTCTTTGAGATTCGGAGAGCAAGCCGATTAATGAGGGATGTCATTCGAAAAATGAGAAATGGCCCATTCCGGTTCTTGATAAGCTCAGGCGGTTTGATGGTTGAGTCTGATTGTCTGCAGATAATCAAACTCATCAAAGAAGAGGCTGAAGATCCCGAGCTGGTAAAAACGTCAATCAATTTGTCATCGAGCTCAATTTTAATGGACGACGGAGGAGTTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTTTACCACCGCCGCAGCATGACCCGGCGGCGCACCAGCACCAGCCGCCGCAGATTGGGATGGAGAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTCATTCAGTACAACATCTTTGGTAACATCTTTGAAGTTACAGCCAAGTACAAACCTCCCATCATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCTGCTCTCAACTCTGAGACAAACGAGCATGTGGCGATCAAGAAGATTGCTAATGCGTTTGACAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTTCTTCGGCATATGGATCATGAAAACGTTGTTGCAATTAGGGACATCATACCTCCGCCTCTAAGGGGAACATTTAATGATGTTTATATAGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGTACTTCCTGTACCAGATTCTCCGTGGATTGAAGTACATACATTCAGCAAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTACTATTAAATGCCAACTGTGACCTGAAAATATGCGATTTTGGACTTGCTCGTGTTACTTCTGAAACTGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGTGCACCAGAGCTCCTACTTAATTCATCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCCTTGTTTCCTGGTCGAGATCATGTGCATCAGTTACGCTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCTGATCTTGTTTTTTTGAACGAGAATGCTAAAAGATACATACGGCAACTTCCTCAATACCATCGGCAGTCATTCATTGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGACAGAGACTTACCGTTGAAGATGCTCTAGCTCATCCGTATTTGACTTCATTGCATGACATTAGTGATGAGCCTGTTTGCACGACGCCCTTCAGCTTCGATTTCGAGCAGCATGCGCTTACCGAAGAACAGATGAAAGAGCTGATCTTTCGAGAGGCACTTGCATTTAACCCCGAGTATCATCAACAATAA | 1443 | 44.84 | MIPSTMAQSRGFFEIRRASRLMRDVIRKMRNGPFRFLISSGGLMVESDCLQIIKLIKEEAEDPELVKTSINLSSSSILMDDGGVSQPDDTVMSEAASLPPPQHDPAAHQHQPPQIGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRGTFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLVFLNENAKRYIRQLPQYHRQSFIEKFPHVHPAAIDLVEKMLTFDPGQRLTVEDALAHPYLTSLHDISDEPVCTTPFSFDFEQHALTEEQMKELIFREALAFNPEYHQQ | 480 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1147313 | 1156070 | + | Hsped.10g01160.1 | Hepe10g0116 | 580663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g0116 | 480 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 269 | 281 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe10g0116 | 480 | ProSiteProfiles | Protein kinase domain profile. | 147 | 432 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe10g0116 | 480 | Pfam | Protein kinase domain | 152 | 432 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe10g0116 | 480 | FunFam | Mitogen-activated protein kinase | 132 | 241 | - | - | |
Hepe10g0116 | 480 | CDD | STKc_TEY_MAPK | 140 | 475 | - | - | |
Hepe10g0116 | 480 | ProSitePatterns | MAP kinase signature. | 182 | 285 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe10g0116 | 480 | Gene3D | Transferase(Phosphotransferase) domain 1 | 231 | 459 | - | - | |
Hepe10g0116 | 480 | MobiDBLite | consensus disorder prediction | 83 | 111 | - | - | |
Hepe10g0116 | 480 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 140 | 470 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Hepe10g0116 | 480 | Gene3D | Phosphorylase Kinase; domain 1 | 130 | 469 | - | - | |
Hepe10g0116 | 480 | ProSitePatterns | Protein kinases ATP-binding region signature. | 153 | 177 | IPR017441 | GO:0005524(InterPro) | |
Hepe10g0116 | 480 | SUPERFAMILY | Protein kinase-like (PK-like) | 152 | 440 | IPR011009 | - | |
Hepe10g0116 | 480 | FunFam | Mitogen-activated protein kinase | 231 | 459 | - | - | |
Hepe10g0116 | 480 | SMART | serkin_6 | 147 | 432 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe07g0706 | Hepe-Chr7:8449842 | Hepe10g0116 | Hepe-Chr10:1147313 | 1.66e-138 | dispersed | |
Hepe09g0380 | Hepe-Chr9:3381297 | Hepe10g0116 | Hepe-Chr10:1147313 | 2.03e-106 | dispersed | |
Hepe10g0116 | Hepe-Chr10:1147313 | Hepe10g1137 | Hepe-Chr10:45175894 | 2.42e-189 | dispersed | |
Hepe10g0116 | Hepe-Chr10:1147313 | Hepe10g1145 | Hepe-Chr10:45365074 | 9.21e-205 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73159 | PF00069 | Pkinase | 4.30E-73 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g0116 | K14512 | - | csv:101204301 | 785.023 |