Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0122 ATGGATCTACTGCGATCGGAGCCGATGCAATTGGGGCAACTGATCATTCCTAATGAATCAGCGCACCGGACGATTTCTTACCTCGGCGACCTCGGTCTCTTCCAATTCAACGATCTCAATGCGTCTAAAAGTCCATTCCAGCGGACGTATGCTGCTCAGATTAAAAGATGTGGGGAAATGGCTCGCAAGCTACGGTATTTCAGGGAGCATATGACAAGGGCTGGTTTATCGTTGTCATCAAATTCTCTAGGGGATCCTGATTTTGATCTGGATAATTTGGAGGTTAAAATTGGAGAATTTGAGACAGAGTTGTTAGAGATAAATGGCAACAACGAGAAGTTACAACGCAATTATAGCGAGCTATTGGAATATAAGCTTGTACTCCAGAAGGTTGGTGGTTTTTTCCATCTAGCTCAAAGGATAGCTGCAGCTCAGCAAAAAGAACTGGAAGTGCAGCAAAACGGGGAAGGATCCCTGGACAGTCCCTTATTATTGGAACAAGAAATGATAACTGATGCAACGAAACAAGTTAAACTAGGATATATCAGTGGTCTAGTTCCGAGAGAAAAGTCAATGGCTTTTGAAAGGATTTTGTTTCGTTCAACTAGGGGAAATGTGTATATGAGACAAGCTGTGGTTGATGGTTCTGTCACTGATCCTGTATCTGGGGACAAGGTCGAGAAAAATGTGTTTGTCATATTTTATTCTGGAGAGAGAGCAAAGAATAAAATTCTGAAAATATGCGAAGCTTTTGGTGCAAACCGTTATCCATTCACTGATGATTCAAGCAAACAATTTCAGATGATTACAGAGGTGTCTGATAAACTCTCTGAATTGAAGACTACCATTGATGTGGGGCAACTGCATCGAAGAAAACTTTTGCAAACGATTGGCCATCAATACGAGCAGTGGAATCTTCTGGTAAAGAAGGAAAAGTCCGTTTACCACACTTTGAATATGCTCAATGTTGATGTAACAAAGAAATGCCTTGTAGGTGAAGGTTGGTGTCCTGTTTTCGCAACAAATCAGATTCAAAGTGTGATGCAGAAGGCAACCTTTGACAGCAAATCACAAATTGAGGCCATCTTTCATGTTTTGCCTACGAAGGCAGCAGCACCAACATATTTCCGCACAAACAAATTTACTTCTTCATTTCAAGAAATCGTGGATGCATATGGGGTTGCTAGGTATCAGGAAGCAAATCCTGGAGTCTACACGATTGTCACCTTCCCTTTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGCTTGTTGCTGGGAACATTATATTTTATAATAAGGGAGAAGAAATTTTCCAGCCAGAAACTTGGAGATATCATTGAAATGACTTTTGGGGGCCGTTATGTTATCATGATGATGGCACTTTTTTCAATCTACACAGGACTGATTTATAATGAATTCTTTTCTGTCCCATTTGAACTGTTTGGGCCTTCTGCGTACGTTTGTCGTGATACTTCATGCAGGGATGCTACTACGATTGGTTTAATAAAGGTTCGTGATACATATCCATTTGGCGTGGATCCTAAGTGGCATGGCACTCGAAGTGAGTTACCTTATCTCAACTCCTTGAAGATGAAGATGTCTATCCTATTGGGAGTAGCTCAAATGAATCTCGGAATTATATTGAGCTTCTTCAATGCAAAATTCTTTGGAGAAAACATTAACATCTGGTTCCAATTTGTTCCACAGATGATATTCTTGAACAGCTTATTCGGTTACCTCTCAGTTCTCATAATTCTAAAATGGTGCTCTGGATCTCAAGCTGATCTGTATCACGTAATGATATATATGTTCTTGAGTCCTACAGATGATTTAGGGGAAAATCAGCTTTTTCCAGGACAGGATGTTCTTCAGCCTCTGTTACTTCTGTCTGCACTCATAGCTGTGCCATGGATGTTGTTTCCCAAGCCTTTGCTGTTGAAGAAACAACATGAAGAAAGGCACCAAGGTCAATCCTACTCCATACTTCACAGCACAGATGACAATATTGAAGCGAAACAACACGCCGGTTCCCATGGCCACGAGGAGTTTGAGTTCAGTGAGGTCTTTGTACACCAACTTATACATACCATAGAGTTTGTACTTGGTGCAGTTTCTAACACAGCATCCTATCTACGTCTATGGGCCCTCAGGTAA 2166 41.14 MDLLRSEPMQLGQLIIPNESAHRTISYLGDLGLFQFNDLNASKSPFQRTYAAQIKRCGEMARKLRYFREHMTRAGLSLSSNSLGDPDFDLDNLEVKIGEFETELLEINGNNEKLQRNYSELLEYKLVLQKVGGFFHLAQRIAAAQQKELEVQQNGEGSLDSPLLLEQEMITDATKQVKLGYISGLVPREKSMAFERILFRSTRGNVYMRQAVVDGSVTDPVSGDKVEKNVFVIFYSGERAKNKILKICEAFGANRYPFTDDSSKQFQMITEVSDKLSELKTTIDVGQLHRRKLLQTIGHQYEQWNLLVKKEKSVYHTLNMLNVDVTKKCLVGEGWCPVFATNQIQSVMQKATFDSKSQIEAIFHVLPTKAAAPTYFRTNKFTSSFQEIVDAYGVARYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLGTLYFIIREKKFSSQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYVCRDTSCRDATTIGLIKVRDTYPFGVDPKWHGTRSELPYLNSLKMKMSILLGVAQMNLGIILSFFNAKFFGENINIWFQFVPQMIFLNSLFGYLSVLIILKWCSGSQADLYHVMIYMFLSPTDDLGENQLFPGQDVLQPLLLLSALIAVPWMLFPKPLLLKKQHEERHQGQSYSILHSTDDNIEAKQHAGSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALR 721
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1207675 1220090 - Hsped.10g01220.1 Hepe10g0122 580669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0122 721 PIRSF ATP6V0A1 1 721 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Hepe10g0122 721 Pfam V-type ATPase 116kDa subunit family 27 720 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Hepe10g0122 721 Coils Coil 90 117 - -
Hepe10g0122 721 PANTHER VACUOLAR PROTON ATPASES 1 720 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0853 Hepe-Chr8:7745608 Hepe10g0122 Hepe-Chr10:1207675 6.73e-320 transposed
Hepe10g0122 Hepe-Chr10:1207675 Hepe02g0483 Hepe-Chr2:4720585 2.37e-254 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0122 K02154 - csv:101209817 1276.54