Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe10g0160 | ATGGCGGCCCCAATTTCATTCCTGTTGGGTTTCTTAATTCTGCTGCTGTTCGTACCAGGTGGGTTTTCGACGAGCTTTACTTTTGTGAACAAATGTGGATTTACAGTCTGGCCGGGCGTTCTGTCGAACGGCGGAGTTCCGCCGCTTCCTATTACTGGTTTCTCTCTACAGACCGGAGAGTCCAAGACGCTTCCGGCGCCGGCGTCGTGGGGTGGCCGTTTCTGGGGCCGAACACTCTGCTCCGAAGATTCCACCGGGAAATTCACCTGCGCTACTGGCGACTGTGGCTCCAACAAACTGGAGTGCGCGGGAAGCGGAGCGACGCCGCCGGCGACTCTGGCAGAGTTCACCCTCGACGGCTCCGGTGGCCTTGATTTCTTCGACGTCAGTCTGGTGGACGGTTACAATCTCCCGATGATTGTCGTGCCTCAGGGGGGCTCCGGCGACAACTGCACGAGCACCGGCTGCGTGGTGGATCTGAACGGGGCGTGTCCGTCGGAGCTTCGGGTGACGAGCGCCGACGGAAGAGAGGGCGTCGCGTGTAAAAGCGCGTGTGATGCGTTTAACCAACCGCAGTATTGTTGTACAGGCGCGTATCAAACACCGGATACTTGTCAGCCGTCGATGTACTCTCAGATCTTCAAGAGAGCGTGCCCACGCGCTTATAGCTACGCGTACGACGATAAGACGAGCACTTTCACATGCGCCAAGGCTGATTACGTCATCACCTTCTGTCCATCGCCAAACACCAGCCAAAAGTCATCGGAGGAACAGAACTCACCGGCGACGGATAACCCATCTCCCGGCAGCAACGGTGCGATGGTTTACGAAGGCGCATCCCTGATCCAAACCGCCGCCGCGCCGCCGCGCGTGGCGGGGATTACAGCGGCAGGTGCGGTGGCGATATGGTGGTTGTGGCAGCAGCTGTTCTTCCACTTCTAA | 942 | 58.49 | MAAPISFLLGFLILLLFVPGGFSTSFTFVNKCGFTVWPGVLSNGGVPPLPITGFSLQTGESKTLPAPASWGGRFWGRTLCSEDSTGKFTCATGDCGSNKLECAGSGATPPATLAEFTLDGSGGLDFFDVSLVDGYNLPMIVVPQGGSGDNCTSTGCVVDLNGACPSELRVTSADGREGVACKSACDAFNQPQYCCTGAYQTPDTCQPSMYSQIFKRACPRAYSYAYDDKTSTFTCAKADYVITFCPSPNTSQKSSEEQNSPATDNPSPGSNGAMVYEGASLIQTAAAPPRVAGITAAGAVAIWWLWQQLFFHF | 313 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 1635964 | 1638640 | + | Hsped.10g01600.1 | Hepe10g0160 | 580707 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe10g0160 | 313 | SUPERFAMILY | Osmotin, thaumatin-like protein | 25 | 247 | IPR037176 | - | |
| Hepe10g0160 | 313 | SMART | tha2 | 26 | 246 | IPR001938 | - | |
| Hepe10g0160 | 313 | Gene3D | Thaumatin | 24 | 246 | IPR037176 | - | |
| Hepe10g0160 | 313 | PRINTS | Pathogenesis-related protein signature | 125 | 141 | IPR001938 | - | |
| Hepe10g0160 | 313 | PRINTS | Pathogenesis-related protein signature | 236 | 245 | IPR001938 | - | |
| Hepe10g0160 | 313 | PRINTS | Pathogenesis-related protein signature | 25 | 37 | IPR001938 | - | |
| Hepe10g0160 | 313 | PRINTS | Pathogenesis-related protein signature | 73 | 84 | IPR001938 | - | |
| Hepe10g0160 | 313 | MobiDBLite | consensus disorder prediction | 249 | 270 | - | - | |
| Hepe10g0160 | 313 | FunFam | THAUMATIN-LIKE PROTEIN 1 | 24 | 246 | - | - | |
| Hepe10g0160 | 313 | Pfam | Thaumatin family | 30 | 246 | IPR001938 | - | |
| Hepe10g0160 | 313 | PANTHER | OS03G0233200 PROTEIN | 12 | 246 | IPR001938 | GO:0005576(PANTHER)|GO:0006952(PANTHER) | |
| Hepe10g0160 | 313 | CDD | TLP-PA | 25 | 245 | - | - | |
| Hepe10g0160 | 313 | ProSiteProfiles | Thaumatin family profile. | 23 | 246 | IPR001938 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe05g0299 | Hepe-Chr5:3696224 | Hepe10g0160 | Hepe-Chr10:1635964 | 1.87e-86 | dispersed | |
| Hepe06g0923 | Hepe-Chr6:56775009 | Hepe10g0160 | Hepe-Chr10:1635964 | 1.79e-106 | dispersed | |
| Hepe08g0278 | Hepe-Chr8:2518500 | Hepe10g0160 | Hepe-Chr10:1635964 | 2.86e-121 | dispersed | |
| Hepe10g0160 | Hepe-Chr10:1635964 | Hepe10g0674 | Hepe-Chr10:8941636 | 3.03e-84 | dispersed | |
| Hepe10g0160 | Hepe-Chr10:1635964 | Hepe10g0162 | Hepe-Chr10:1660582 | 5.68e-100 | proximal | |
| Hepe01g1607 | Hepe-Chr1:81348554 | Hepe10g0160 | Hepe-Chr10:1635964 | 2.30e-152 | wgd | |
| Hepe10g0160 | Hepe-Chr10:1635964 | Hepe04g1597 | Hepe-Chr4:71470404 | 6.66e-106 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe10g0160 | - | - | - | 0.0 |