Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0176 ATGTCTCTCTTCTCCTTTCTTCTCCTCTTTTTTTCATTCCTTCCCTCTTTCAATAATGCATTAACCTACCACTACTACGACCACACATGCCCTAATCTCGAGTCCATCGTCGCCCAACAAGTTCACTTGGCCATCGTTAACGACAAGACGGTCTCTGCCGCCCTGCTTCGAATGCACTTTCACGACTGTTTCGTTCGAGGTTGTGATGGCTCTGTGCTTCTCGACTCCAAGGGAAAGAACACTGCCGAAAAAGATGCCCCTCCCAATATATCGTTGCATGCTTTTTATGTCATCGACAATGCCAAAAAGGCCATTGAATCTGCATGTCCTGGCGTCGTTTCTTGTGCTGATATCTTGGCCCTCGCTGCTCGAGATGCTGTTACTTTGTCTGGAGGTCCTCATTGGGAAGTCCCAAAAGGAAGAAAAGATGGAAGAATCTCAAAAGCAAATGAAACTAGACAATTGCCTGCTCCCACATTCAACTTCTCTCAACTCCAACAAAGCTTCTCCCAAAGAGGTCTTTCTATACAAGATCTCGTAGCTCTTTCAGGCGGCCACACTCTTGGATTCGCCCATTGCTCGTCGTTCCAAAACCGAATCCACAACTTCAGCTCGACCCTCGACGTCGACCCGTCGCTGCATCCGGCGTTCGCGGCTAGCCTCCGGAGCGTATGTCCGGCGCACAACAAGGTGAAAAACGCCGGCTCCGGCATGGATTCAACTTCCACTATATTTGACAATGTATATTTCAAGCTCCTTCTTCAAGGGCAGAGCATTTTTTCTTCAGATCAATCTTTGCTTTCAACTCCCAAAACAAAGGCTTTGGTTTCAAAATTCGCCAATGAACAACAGCTCTTTGAGAAGGCTTTTGTCAAGTCCATGGTGAAGATGAGTCGGATCGCCGGCGCCGGCGAAGAAGTCCGGCTGAACTGCAGGGTGGTCAGATGA 948 48.42 MSLFSFLLLFFSFLPSFNNALTYHYYDHTCPNLESIVAQQVHLAIVNDKTVSAALLRMHFHDCFVRGCDGSVLLDSKGKNTAEKDAPPNISLHAFYVIDNAKKAIESACPGVVSCADILALAARDAVTLSGGPHWEVPKGRKDGRISKANETRQLPAPTFNFSQLQQSFSQRGLSIQDLVALSGGHTLGFAHCSSFQNRIHNFSSTLDVDPSLHPAFAASLRSVCPAHNKVKNAGSGMDSTSTIFDNVYFKLLLQGQSIFSSDQSLLSTPKTKALVSKFANEQQLFEKAFVKSMVKMSRIAGAGEEVRLNCRVVR 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1784585 1786193 + Hsped.10g01760.1 Hepe10g0176 580723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0176 315 Gene3D - 24 314 - -
Hepe10g0176 315 ProSiteProfiles Plant heme peroxidase family profile. 20 315 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Hepe10g0176 315 PANTHER PEROXIDASE 25-RELATED 22 311 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 Gene3D Peroxidase, domain 2 156 297 - -
Hepe10g0176 315 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 FunFam Peroxidase 156 297 - -
Hepe10g0176 315 Pfam Peroxidase 37 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Hepe10g0176 315 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g0176 315 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe10g0176 315 FunFam Peroxidase 24 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0477 Hepe-Chr8:4193591 Hepe10g0176 Hepe-Chr10:1784585 9.38e-87 dispersed
Hepe09g0986 Hepe-Chr9:10111066 Hepe10g0176 Hepe-Chr10:1784585 1.36e-65 dispersed
Hepe10g0176 Hepe-Chr10:1784585 HepeContig65g0027 Hepe-ChrContig65:3130350 1.40e-86 dispersed
Hepe04g1622 Hepe-Chr4:71616041 Hepe10g0176 Hepe-Chr10:1784585 7.29e-146 transposed
Hepe07g0201 Hepe-Chr7:1774637 Hepe10g0176 Hepe-Chr10:1784585 1.14e-123 transposed
Hepe10g0176 Hepe-Chr10:1784585 Hepe04g1608 Hepe-Chr4:71538782 4.25e-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0176 K00430 - csv:101214403 531.176