Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0187 ATGAATTGTACTGATCCGGAGCCGTTGGTGTACGTTCACGGCGACCTCGATTTGAAAATCATTGAGGCGCGCCGTTTGCCGAATATGGATTTGTTATCGGAGCGTATTCGGCGGTTTTTTACTGTTTTTAATTCTTGTCGGAAACCGTTTTCCGACAAGAAGGAAGCCGATCATCCGCACCACCGGAATATTATTACTAGTGATCCTTATGTTACCGTTTGTCTTGCCGGAGCGACGGTTGCTCGGACGCGAGTCATTTCGAACTCGCAGAACCCTATCTGGAACGAGCATTTTAATATCCCTCTTGCTCATCCGGTCTCGCAGGTGGAGTTTCATGTGAAGGACAACGATGTGTTTGGTGCGGATTTGATTGGTGTTGCTACGGTCCCTGCGCGCAGAATTCTTTCTGGCGAAACCATAAATGAGTGGTTTCCGATTATTGGTACGTTTGGGAAACCGCCGAAGCCGGATTCGGCTGTGCGTTTGGAAATGAAATTCACAAAGTGTGAGGACAATCCTCTGTACCGGTACGGCATTGCGGCTGATCCCGATCATTTCGGCGTTCGGAATTGCTATTTTCCGGTGCGGCATGGGGGTTCGGTAACGCTTTATCAGGACGCGCACGTTCCTGATTCCATGTTGGAGAAGATTGAATTGGAAAATGGGAATGTTTACAATCATGAGAATTGCTGGGAGGATATATGCCATGCAATTTTGGAGGCTCACCATTTAGTATACATCGCCGGTTGGTCCATATATCATAAGGTAAAGCTGGTGAGAGAGCCTTCCAAGCCTTTGCCCAATGGTGGGAATTTGAACTTGGGAGAGTTGCTCAAGTACAAATCACAAGAAGGGGTGCGAGTATTGTTATTGGTTTGGGATGACAAGACTTCCCACAGCAAGTTCTTCCTCAATACGGCTGGAGTGATGCAGACTCATGATGAGGAGACCCGAAAATTTTTCAAGCACTCGTCTGTTACGTGTATGCTGTCACCCCGATATGCCAGCAGTAAGCTTAGCATTTTTAAGCAACAGGTTGTTGGAACCCTTTTTACCCATCACCAGAAGTGTGTGATCGTGGATACTCAAGCTTCTGGAAATTACCGGAAGATAAGTGCTTTTATTGGAGGACTTGACCTTTGTGATGGTCGTTATGATACTCCTGAACATCGGTTGATGAAAGATCTTGACACTGTATTTGAAGATGATTATCATAATCCAACCTTTTCTGGAGGTACAAAGGCTCCTCGGCAGCCATGGCATGATCTACATTGCAAACTTGAAGGGCCTTCTGCATATGATGTGCTTACTAACTTTGAACAACGATGGCGAAAAGCCACAAAATGGTCTGAATTAGGTCAGCGGTTCAAAAGAGCGACACATTGGCATGAAGACGCCTTAATAAAGTTGGAACGCATATCTTGGATACTTAGTCCATCTCAGTCAATCCCCAATGATGATCCTTTGTTATGGGTTTCCAAGGAGAACGATCCTGGCAATTGGCATGTTCAGGTTTTCCGATCCATAGATTCAGGATCTTTGAGAGGATTTCCCAAAGACGTTTTTCAAGCTGAGTTGCAGAATCTTGTTTGTGCAAAAAATTTGGTTATTGACATTAGTATTCAAACAGCATACATCCAAGCAATAAGATCTGCCCAACACTTCATATACATTGAGAATCAGTATTTTATTGGATCATCGTTTGCATGGCCTTCATACAAAGAAGCAGGTGCTGATAATCTTATTCCTATGGAGTTGGCGTTGAAGATCGCTAGTAAGATAAGAGCCAATGAGAGGTTTGCTGTATATGTGGTGCTACCTATGTGGCCTGAAGGTTCTCCCACTTCTGTTTCTGTGCAAGAAATCCTGTTTTGGCAGGGCCAGACAATCCAAATGATGTATGAAGTCATTGGACGAGAGTTGAAATATAAGAATCTCGGGAACGCTCATCCCTCGGACTACTTAAACTTTTACTGTCTTGGCAATAGGGAACCGCACGAGGACTTATCATGTTCCTCTGGTCATTCTTCCAAGGGCGAAGATATGGTTTCAGACTCGCAAAAGTTCCGGAGATTCATGATATATGTACATGCGAAAGGAATGGTGGTTGATGATGAGTATGTAATAATAGGGTCTGCAAATATAAATCAAAGATCAATGGCAGGTTCAAGGGACACTGAGATTGCCATGGGTGCATATCAACCCAGTAACACGTGGGGTAAGAAGAAACGACATCCACGAGGCCAGGTTTATGGCTATAGAATGTCCCTCTGGGCTGAACATTTGGGAAAGATTAATGATTGCTTCAAGGAGCCTGAAAGTCTGGCTTGTGTGAACACTGTTAACAACATAGCTGAAGGTAACTGGAAGAAATACACAGCACCGGAATTTTCGCCATTGCGAGGGCACCTCCTCAAGTACCCGATTGAGGTCAGCGAAAGTGGCAAGGTCGGTCCGTTGACTGGACACGAGACTTTCCCCGACGTTGGTGGTAAGGTTCTTGGAGCTCGATCTAACCTCCCTGATGCTCTTACTACATAA 2541 44.94 MNCTDPEPLVYVHGDLDLKIIEARRLPNMDLLSERIRRFFTVFNSCRKPFSDKKEADHPHHRNIITSDPYVTVCLAGATVARTRVISNSQNPIWNEHFNIPLAHPVSQVEFHVKDNDVFGADLIGVATVPARRILSGETINEWFPIIGTFGKPPKPDSAVRLEMKFTKCEDNPLYRYGIAADPDHFGVRNCYFPVRHGGSVTLYQDAHVPDSMLEKIELENGNVYNHENCWEDICHAILEAHHLVYIAGWSIYHKVKLVREPSKPLPNGGNLNLGELLKYKSQEGVRVLLLVWDDKTSHSKFFLNTAGVMQTHDEETRKFFKHSSVTCMLSPRYASSKLSIFKQQVVGTLFTHHQKCVIVDTQASGNYRKISAFIGGLDLCDGRYDTPEHRLMKDLDTVFEDDYHNPTFSGGTKAPRQPWHDLHCKLEGPSAYDVLTNFEQRWRKATKWSELGQRFKRATHWHEDALIKLERISWILSPSQSIPNDDPLLWVSKENDPGNWHVQVFRSIDSGSLRGFPKDVFQAELQNLVCAKNLVIDISIQTAYIQAIRSAQHFIYIENQYFIGSSFAWPSYKEAGADNLIPMELALKIASKIRANERFAVYVVLPMWPEGSPTSVSVQEILFWQGQTIQMMYEVIGRELKYKNLGNAHPSDYLNFYCLGNREPHEDLSCSSGHSSKGEDMVSDSQKFRRFMIYVHAKGMVVDDEYVIIGSANINQRSMAGSRDTEIAMGAYQPSNTWGKKKRHPRGQVYGYRMSLWAEHLGKINDCFKEPESLACVNTVNNIAEGNWKKYTAPEFSPLRGHLLKYPIEVSESGKVGPLTGHETFPDVGGKVLGARSNLPDALTT 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1879061 1884893 + Hsped.10g01870.1 Hepe10g0187 580734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0187 846 Gene3D C2 domain 12 174 IPR035892 -
Hepe10g0187 846 Pfam Phospholipase D C terminal 767 836 IPR024632 -
Hepe10g0187 846 Gene3D Endonuclease Chain A 523 738 - -
Hepe10g0187 846 FunFam Phospholipase D delta 221 465 - -
Hepe10g0187 846 Pfam C2 domain 15 145 IPR000008 -
Hepe10g0187 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 349 384 IPR001736 GO:0003824(InterPro)
Hepe10g0187 846 SMART pld_4 349 384 IPR001736 GO:0003824(InterPro)
Hepe10g0187 846 SMART pld_4 692 719 IPR001736 GO:0003824(InterPro)
Hepe10g0187 846 PANTHER PHOSPHOLIPASE D 11 834 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Hepe10g0187 846 Gene3D Endonuclease Chain A 214 471 - -
Hepe10g0187 846 ProSiteProfiles C2 domain profile. 1 144 IPR000008 -
Hepe10g0187 846 Pfam Phospholipase D Active site motif 694 719 IPR001736 GO:0003824(InterPro)
Hepe10g0187 846 PIRSF PLD_plant 2 846 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Hepe10g0187 846 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 168 IPR035892 -
Hepe10g0187 846 CDD C2_plant_PLD 10 167 - -
Hepe10g0187 846 SMART C2_3c 15 143 IPR000008 -
Hepe10g0187 846 SUPERFAMILY Phospholipase D/nuclease 541 778 - -
Hepe10g0187 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 692 719 IPR001736 GO:0003824(InterPro)
Hepe10g0187 846 SUPERFAMILY Phospholipase D/nuclease 225 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1618 Hepe-Chr3:73083410 Hepe10g0187 Hepe-Chr10:1879061 1.56e-234 dispersed
Hepe04g1636 Hepe-Chr4:71716067 Hepe10g0187 Hepe-Chr10:1879061 0.0 dispersed
Hepe06g1205 Hepe-Chr6:61581699 Hepe10g0187 Hepe-Chr10:1879061 2.68e-307 dispersed
Hepe08g2288 Hepe-Chr8:62635055 Hepe10g0187 Hepe-Chr10:1879061 4.60e-34 dispersed
Hepe10g0187 Hepe-Chr10:1879061 Hepe10g0254 Hepe-Chr10:2651338 4.56e-234 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0187 K01115 - csv:101213442 1615.51