Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0230 ATGAAGAAAACAAGTCGGATAATGAAGCTTCTTCTTCTGTTTTCTTCTCTTCCTCATCGATTTCTCTCTCGTTTCGTGGTGGCTGCCTCTTCTTTGCCTCCTCCTGCTCCATTCCCTTCTCCCATTTCTCCATTTTTTGATTCAATGGCTGCTTCTTCTCCAGGTGGTAATTTCGATGGGAATGGAGAGCCTTACAAATACAACCGAACCCCACAAGAAAATGCTAATTGTCCTAATCGTTTGTGCTTCATTCGGTGCATTCTTAGTGGCTTCACTGTGTTTGTGGATTTATTACAGAAGGAACTCTTCGAATTTCCATGGTCCAAACGTTCGGAGCTCAGCTCAAACAAAATGATGGGTAACAATAAATTCTCTGTTCCACTCATTGATTATTCGGTGTTGGAAAAGGCCACCAACATTTTCGAGGAAAGTAATATTCTGGGCGAAGGTGGATTTGGACGGGTTTACAAAGCTCGATTAGAAGATAACTTACACGTTGCTGTGAAGAAATTAGAATGTAGCGATAAGGAGTCAGAGAAAGAATTTGAGAATGAAGTTGATATATTGAGCAAAATTCAACATTCAAACATCATCCGCATTCTAGGTTACACCATTCATGAGGAATCAAAGCTGATTGTGTACGAGTTAATGGAAAATGGATCACTGGAAACACTATTACATGGACCTTCACATGGAGAGGCATTAACATGGCACATGCGAATGAAGATAGCTCTGGATTCAGCTAGAGGATTAGAATATCTGCATGAGCACTGCAAACCTGCAGTCATACATAGAGATCTGAAATCCTCCAATATTCTTTTAGATCCAAACTTCAATGCCAAGCTTTCTGATTTTGGGCTGTCTGTAATTGTTGGAGCTCAAAACAAGAACGATATTAAGCTTTCTGGGACGATGGGTTATGTTGCTCCTGAATATCTTTTAGATGGTAAATTGACTGATAAGAGTGATGTCTATGCCTTTGGTGTTGTGCTTTTGGAGCTTCTTTTAGGAAGAAGACCTGTTGAAAAATTGGCACCATCTCAATGTCAATCCATTGTCACATGGGCAATGCCTCAGCTCACTGATAGAACAAAGTTGCCCGAAATCGTCGACCCAGTGATTAGAAACACAATGGATCCAAAGCACTTATTTCAGGTTGCTGCTGTCGCCGTGTTGTGCGTGCAACCCGAACCGAGCTATCGCCCCCTAATAACAGACGTTTTGCACTCTCTTATTCCTCTTGTTCCGGTTGAGCTTGGGGGGACGCTCAGATCATCAACACAACAAGCTCCTGCGGGTTCAGCTTAG 1308 42.13 MKKTSRIMKLLLLFSSLPHRFLSRFVVAASSLPPPAPFPSPISPFFDSMAASSPGGNFDGNGEPYKYNRTPQENANCPNRLCFIRCILSGFTVFVDLLQKELFEFPWSKRSELSSNKMMGNNKFSVPLIDYSVLEKATNIFEESNILGEGGFGRVYKARLEDNLHVAVKKLECSDKESEKEFENEVDILSKIQHSNIIRILGYTIHEESKLIVYELMENGSLETLLHGPSHGEALTWHMRMKIALDSARGLEYLHEHCKPAVIHRDLKSSNILLDPNFNAKLSDFGLSVIVGAQNKNDIKLSGTMGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRRPVEKLAPSQCQSIVTWAMPQLTDRTKLPEIVDPVIRNTMDPKHLFQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRSSTQQAPAGSA 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2432494 2436359 - Hsped.10g02300.1 Hepe10g0230 580777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0230 435 SMART serkin_6 141 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0230 435 Gene3D Phosphorylase Kinase; domain 1 105 216 - -
Hepe10g0230 435 SUPERFAMILY Protein kinase-like (PK-like) 119 411 IPR011009 -
Hepe10g0230 435 PANTHER OS01G0750732 PROTEIN 62 416 IPR050885 -
Hepe10g0230 435 CDD STKc_IRAK 147 414 - -
Hepe10g0230 435 FunFam probable receptor-like protein kinase At1g80640 217 416 - -
Hepe10g0230 435 FunFam Protein kinase superfamily protein 109 216 - -
Hepe10g0230 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0230 435 Pfam Protein tyrosine and serine/threonine kinase 144 378 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0230 435 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524(InterPro)
Hepe10g0230 435 ProSiteProfiles Protein kinase domain profile. 141 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0230 435 Gene3D Transferase(Phosphotransferase) domain 1 217 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g1569 Hepe-Chr9:42598454 Hepe10g0230 Hepe-Chr10:2432494 2.67e-33 dispersed
Hepe09g1833 Hepe-Chr9:58375293 Hepe10g0230 Hepe-Chr10:2432494 6.57e-86 dispersed
Hepe10g0230 Hepe-Chr10:2432494 Hepe07g1185 Hepe-Chr7:28179256 9.67e-80 dispersed
Hepe10g0230 Hepe-Chr10:2432494 Hepe02g1339 Hepe-Chr2:16921931 2.55e-71 wgd
Hepe10g0230 Hepe-Chr10:2432494 Hepe03g1655 Hepe-Chr3:73408316 2.41e-154 wgd
Hepe10g0230 Hepe-Chr10:2432494 Hepe09g0616 Hepe-Chr9:5753608 1.13e-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73160 PF00069 Pkinase 9.80E-50 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0230 - - - 0.0