Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0254 ATGGAGGAATATCCGGATTTTCCTGTTTGTTTGACGCATTTTCCGAGAAAAGTTGGGACCCTTTTCTCGTTCAACTCTGCTGCGAGAGACAAATGCCGCGCTTGCTTCATGGGACGCTTCATGCCAATATATTTGGAATCGACAGGCTTCAAACTGGATTTCCTATTTTCTGCGGGAAGCATTGTCTTGTGTCCTATTCTCAAACTGGGGTCTAATTTCTTGCCGGTCATTTCTTTTCTATATGCACTCAATATGAAGATTGTTGGATCTCAAATGTATGCAACAGTCGATCTTGATAAGGCCCGAGTTGGCCGGACGAGAATAGTGGATCAGCCATACAGTCCTCAGTGGAACGAGAGTTTTCGTATATATAGTGCCCATACAGTGTCACATGTTATATTCACAGTTAAAGATGGAGGTGTAATTGGTGCAACATTAATTGGAAGAGCTTATGTGCCTGTTGAGGATATCATTAAGGGATATGTATATGAGAAATGGATTGAAATATTAGATGAAGACTGTAAGCCTATATACGGTCGTTCTAGAATCCATGTAAAGTTGCGATTTTCAAGTGCTAATGAAGACAGGAGCTGGTCTCAAGGAATCCCAGATCCAAAATTCGGTGGTGTACCTTACACATTCTTCAACCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAAGATGCTCATGTTTTAAACAACTTCCTTCCTCGAGTTGGTTTGTCAGGAGGGAATCATCATGAAATACACAGGTGTTGGGAGGATATTTTTGATGCAATTAGCAATGCGAGACACTTGATTTACATAACTGGTTGGTCTGTGTATACAGAAATAACCTTGATAAGAGACCGAGAAAGAAGGCAGACAGGAGAGGATATTACTCTCGGGCAACTGCTAAAGAAGAAAGCTGAAGAAGGTGTGACTGTTTTGCTTCTTGTTTGGGATGACAGAACTTCCATTGAAGAGTTCAAAAGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGTGTACTTCAGGGACTCGAAGGTACATTGCATTCTGTGTCCTCGGAATCCTGATGATAGTAGAAGCCTAATTCAGGGGTTTGAGACTGCTACCATGTTTACACACCACCAAAAAACAATTGTGCTTGATAGTGAAATGGCTAGCGGAGGAACAGAGAAAAGAAGGATTGTGAGTTTTGTTGGTGGTATTGATCTGTGTGATGGGAGATATGACACACCAAAACACACTTTGTTTTCAACTTTAGATACAATCCACTATAGTGATTTTCACCAGCCTAACTTTTCAGGCTCTTCAATTAGGAAAGGTGGTCCACGGGAACCATGGCATGACATCCATTGCCGCCTAGAAGGGCCTGTTGCTTGGGATATTTTGTACAATTTTGAGCAAAGATGGCGAAAGCAAGTTGGAAACAACTTGTTGATTCCAATGCAAAAGCTTGAAGAAACCATTACCCGACCATTAATGGTTTTACCATCAGACGACCCTGACACGTGGAATGTTCAAATATTTCGATCTATTGATGGTGGTGCTGTAGAGGGATTTCCAGCCACACCTGAAGATGTAGCCAAAGTAGGCCTTGTAAGTGGGAAAAATACTGTTATAGATAGGAGTATTCAAGATGCTTATATTAATGCTATTCGCCGAGCAAAAAATTTCATATACATCGAGAATCAATATTTCCTTGGAAGCTCTTATGGTTGGAAATCAAATGGTATAAGGGTAGAAGAAATCAATGCCTTGCATCTTATTCCGAAGGAGATCTCACTGAAGATTGTGAGCAAGATTGAAGCTGGAGAGAGGTTTACAGCATATATTGTGATTCCAATGTGGCCAGAAGGTATTCCTGAGAGTGCTTCAGTTCAAGCTATACTAGATTGGCAAAGGAGAACGTTAGACATGATGTACACAGATATAGCTCAAGCCCTTCGAAAGAAGGGTCTCGATGCAAATCCTAGAGATTACCTGACATTCTTCTGCCTTGGCAATCGGGAGAAGAAGAGGACTGGAGAATATGTACCACCAGAGAAACCAGAGCCCAACTCGGATTATGCTCGCGCTCAAGAGTTCCGACGTTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCCAACATCAACCAGAGATCAATGGATGGAGGAAGAGACTCTGAGATTGCAATGGGGGCTTTTCAACCTCATCACTTGGCATCTGGTGAGCCTGCAAGAGGTCAAATCTATGGTTTACGAGTGGCTCTCTGGTACGAGCATCTTGGTCTGTTTGACAAAGTCTTTCAAAACCCAGAGAGTGAAGATTGCGCCCAGTTCGTAAACAAGCTTGCTCTAGAGAACTGGCAATTTTACTCCGACGATACCTTTGATGGCGATCTTCCTGGTCATCTTCTTTCCTACCCCATTGAAGTAGCCCCCAACGGATCGGTTTCGGCGCTGCCAAAATTTGAATTTTTCCCTGACACGAAGGCTCGTGTTCTTGGCCAACTGGCCGAGTATCTACCTCCAATCCTTACCACTTGA 2553 42.38 MEEYPDFPVCLTHFPRKVGTLFSFNSAARDKCRACFMGRFMPIYLESTGFKLDFLFSAGSIVLCPILKLGSNFLPVISFLYALNMKIVGSQMYATVDLDKARVGRTRIVDQPYSPQWNESFRIYSAHTVSHVIFTVKDGGVIGATLIGRAYVPVEDIIKGYVYEKWIEILDEDCKPIYGRSRIHVKLRFSSANEDRSWSQGIPDPKFGGVPYTFFNQRWGCKVSLYQDAHVLNNFLPRVGLSGGNHHEIHRCWEDIFDAISNARHLIYITGWSVYTEITLIRDRERRQTGEDITLGQLLKKKAEEGVTVLLLVWDDRTSIEEFKRDGLMATHDQETAVYFRDSKVHCILCPRNPDDSRSLIQGFETATMFTHHQKTIVLDSEMASGGTEKRRIVSFVGGIDLCDGRYDTPKHTLFSTLDTIHYSDFHQPNFSGSSIRKGGPREPWHDIHCRLEGPVAWDILYNFEQRWRKQVGNNLLIPMQKLEETITRPLMVLPSDDPDTWNVQIFRSIDGGAVEGFPATPEDVAKVGLVSGKNTVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSNGIRVEEINALHLIPKEISLKIVSKIEAGERFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDIAQALRKKGLDANPRDYLTFFCLGNREKKRTGEYVPPEKPEPNSDYARAQEFRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHHLASGEPARGQIYGLRVALWYEHLGLFDKVFQNPESEDCAQFVNKLALENWQFYSDDTFDGDLPGHLLSYPIEVAPNGSVSALPKFEFFPDTKARVLGQLAEYLPPILTT 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2651338 2655683 - Hsped.10g02540.1 Hepe10g0254 580801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0254 850 FunFam Phospholipase D delta 243 487 - -
Hepe10g0254 850 Gene3D C2 domain 81 200 IPR035892 -
Hepe10g0254 850 SUPERFAMILY Phospholipase D/nuclease 530 779 - -
Hepe10g0254 850 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 696 723 IPR001736 GO:0003824(InterPro)
Hepe10g0254 850 Pfam C2 domain 90 168 IPR000008 -
Hepe10g0254 850 SMART pld_4 368 406 IPR001736 GO:0003824(InterPro)
Hepe10g0254 850 SMART pld_4 696 723 IPR001736 GO:0003824(InterPro)
Hepe10g0254 850 FunFam Phospholipase D 509 742 - -
Hepe10g0254 850 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 368 406 IPR001736 GO:0003824(InterPro)
Hepe10g0254 850 Pfam Phospholipase D Active site motif 369 406 IPR001736 GO:0003824(InterPro)
Hepe10g0254 850 Pfam Phospholipase D Active site motif 698 723 IPR001736 GO:0003824(InterPro)
Hepe10g0254 850 SUPERFAMILY Phospholipase D/nuclease 196 484 - -
Hepe10g0254 850 Pfam Phospholipase D C terminal 768 839 IPR024632 -
Hepe10g0254 850 PIRSF PLD_plant 72 850 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Hepe10g0254 850 CDD C2_plant_PLD 86 189 - -
Hepe10g0254 850 Gene3D Endonuclease Chain A 242 491 - -
Hepe10g0254 850 SMART C2_3c 74 166 IPR000008 -
Hepe10g0254 850 ProSiteProfiles C2 domain profile. 44 167 IPR000008 -
Hepe10g0254 850 Gene3D Endonuclease Chain A 516 740 - -
Hepe10g0254 850 PANTHER PHOSPHOLIPASE D 88 837 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Hepe10g0254 850 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 87 190 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1477 Hepe-Chr2:19180457 Hepe10g0254 Hepe-Chr10:2651338 9.05e-206 dispersed
Hepe10g0187 Hepe-Chr10:1879061 Hepe10g0254 Hepe-Chr10:2651338 4.56e-234 transposed
Hepe10g0254 Hepe-Chr10:2651338 Hepe02g1369 Hepe-Chr2:17394801 0.0 wgd
Hepe10g0254 Hepe-Chr10:2651338 Hepe03g1618 Hepe-Chr3:73083410 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0254 K01115 - csv:101207900 1439.09