Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g0263 | ATGCAGGAGCAGGCGACGAGTTCAGCGGCCGCGAGTTCGTTGCCGTCGAGCAGTGAAAGATCGTCCAGCTCGGCTCTTCACCTCGAAGTTAAAGAAGGTATGGAGAGCGATGAGGAGATCCGGAGAGTGCCGGAAATAGGCGGCGAATCGGCCGGAACATCGGCCTCCGGCAGGGACACCGGTTCGGTCGCTGGTCCGGACCGGGTTCAGGTTTCTCGGGAGGGTCAAAGGAAGAGAGGGAGAAGTCCGGCGGACAAAGAAAGTAAGAGATTGAAGAGATTGCTGAGAAATAGAGTATCGGCACAGCAAGCTAGGGAGAGAAAAAAGGCGTATTTGAATGACTTAGAGATAAGGGTTAAGGATTTGGAGAAGAAGAATTCAGAACTTGAAGAAAGGCTCTCCACTTTACAGAATGAGAACCAGATGCTTAGACAAGTATGTTTTAATTACTCTTTTATCATTTATTCAATAATTATATTTTAA | 483 | 48.03 | MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDTGSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLRQVCFNYSFIIYSIIIF | 160 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2713762 | 2716233 | - | Hsped.10g02630.1 | Hepe10g0263 | 580810 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g0263 | 160 | MobiDBLite | consensus disorder prediction | 1 | 95 | - | - | |
Hepe10g0263 | 160 | CDD | bZIP_HY5-like | 90 | 141 | - | - | |
Hepe10g0263 | 160 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 92 | 107 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0263 | 160 | SMART | brlzneu | 85 | 149 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0263 | 160 | MobiDBLite | consensus disorder prediction | 71 | 95 | - | - | |
Hepe10g0263 | 160 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 87 | 145 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0263 | 160 | Pfam | bZIP transcription factor | 86 | 145 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0263 | 160 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Hepe10g0263 | 160 | Coils | Coil | 84 | 146 | - | - | |
Hepe10g0263 | 160 | PANTHER | TRANSCRIPTIONAL ACTIVATOR HAC1 | 1 | 148 | IPR044280 | GO:0000981(InterPro)|GO:0005634(PANTHER)|GO:0010017(PANTHER)|GO:0010099(PANTHER)|GO:0010114(PANTHER)|GO:0010218(PANTHER)|GO:0045944(InterPro) | |
Hepe10g0263 | 160 | Gene3D | Single helix bin | 108 | 149 | - | - | |
Hepe10g0263 | 160 | MobiDBLite | consensus disorder prediction | 30 | 45 | - | - | |
Hepe10g0263 | 160 | FunFam | Transcription factor HY5 | 108 | 149 | - | - | |
Hepe10g0263 | 160 | SUPERFAMILY | Leucine zipper domain | 89 | 146 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2035 | Hepe-Chr1:85061171 | Hepe10g0263 | Hepe-Chr10:2713762 | 1.59e-35 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56440 | PF00170 | bZIP_1 | 3.60E-14 | CL0018 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g0263 | K16241 | - | csv:101218051 | 252.292 |