Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0263 ATGCAGGAGCAGGCGACGAGTTCAGCGGCCGCGAGTTCGTTGCCGTCGAGCAGTGAAAGATCGTCCAGCTCGGCTCTTCACCTCGAAGTTAAAGAAGGTATGGAGAGCGATGAGGAGATCCGGAGAGTGCCGGAAATAGGCGGCGAATCGGCCGGAACATCGGCCTCCGGCAGGGACACCGGTTCGGTCGCTGGTCCGGACCGGGTTCAGGTTTCTCGGGAGGGTCAAAGGAAGAGAGGGAGAAGTCCGGCGGACAAAGAAAGTAAGAGATTGAAGAGATTGCTGAGAAATAGAGTATCGGCACAGCAAGCTAGGGAGAGAAAAAAGGCGTATTTGAATGACTTAGAGATAAGGGTTAAGGATTTGGAGAAGAAGAATTCAGAACTTGAAGAAAGGCTCTCCACTTTACAGAATGAGAACCAGATGCTTAGACAAGTATGTTTTAATTACTCTTTTATCATTTATTCAATAATTATATTTTAA 483 48.03 MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDTGSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLRQVCFNYSFIIYSIIIF 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2713762 2716233 - Hsped.10g02630.1 Hepe10g0263 580810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0263 160 MobiDBLite consensus disorder prediction 1 95 - -
Hepe10g0263 160 CDD bZIP_HY5-like 90 141 - -
Hepe10g0263 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g0263 160 SMART brlzneu 85 149 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g0263 160 MobiDBLite consensus disorder prediction 71 95 - -
Hepe10g0263 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 145 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g0263 160 Pfam bZIP transcription factor 86 145 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g0263 160 MobiDBLite consensus disorder prediction 1 24 - -
Hepe10g0263 160 Coils Coil 84 146 - -
Hepe10g0263 160 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 148 IPR044280 GO:0000981(InterPro)|GO:0005634(PANTHER)|GO:0010017(PANTHER)|GO:0010099(PANTHER)|GO:0010114(PANTHER)|GO:0010218(PANTHER)|GO:0045944(InterPro)
Hepe10g0263 160 Gene3D Single helix bin 108 149 - -
Hepe10g0263 160 MobiDBLite consensus disorder prediction 30 45 - -
Hepe10g0263 160 FunFam Transcription factor HY5 108 149 - -
Hepe10g0263 160 SUPERFAMILY Leucine zipper domain 89 146 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2035 Hepe-Chr1:85061171 Hepe10g0263 Hepe-Chr10:2713762 1.59e-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56440 PF00170 bZIP_1 3.60E-14 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0263 K16241 - csv:101218051 252.292