Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0270 ATGAGCACAACTCAACGTATCTTCAACTCTCATTCAATTTTTGGCAGGGTCTACGATTGTAGTGCAATTTTGAAACTGAAGGAAGAGAAGGAAGAAAAGAAAATGACTAAGAAGAAGAACCCTTTGGTTTTCCTGGATGTCTCAATTGATGGAGATCCAAGGGAAAAAATGGTCTTTGAGCTGTTTTATGACACTGCTCCAAAAACGGCCGAGAATTTTCGTGCACTGTGTACAGGAGAGAAAGGAATTGGCCCCAAAACTGGAAGACCACTACATTATAAGACATCTTTTTTTCATCGGATTATTAGAGGTTCTATGGCACAGGCCGGAGATTTTGTCAAACGAGATGGTACTGTTGGAGAGAGCATATATGGTGGAAAGTTTCCAGATGAACCACCTCGACTAAAACATGATGGACCTGGTCTTCTATCAATGGCAATTGCTGACCGTGACACTTTAGGCTCCCATTTCCTTATCACATTTAAGGCTAATAATCATCTTGACAGGAAGCATGTAGTATTTGGAAAGCTTGTCCAAGGTTTTGACGTACTGAAAAAGATAGAAGGTGTGGATGTAGAAGACAGCGTTCCAACTGTTACAGTGAAAATTGTCAATTGTGGCGAATTTAGCGAGGAAAAAAGAAAGATGAATAAAATGAAAATAGGAAAGAATGCTTCTTCAGATGATGATAGTCATGAAGAAAAGAGAAGAGGAAAGCAGAAAAAACCAAGGGAGAAGAAGAGGAGGAAGAAAAGATACCACACATCCGAGTCAGATAGTTCTTCTGATTCAGAAGATTCTGACTCTGAGAGTGGTTCTGACACAGATTTGTCGTCATCATCATCTTCCGAAAGTTCTTCAAGTGATGACAGGTCTAGAAAGAGAAAGAGGACTTCTAAGAGAGGCAGAAATAGGCGTGGGAGAAGAAAAGATAAAAGACGTGACAGAAAGAAACGGAGGCATGATAAGAAGTCGAAGAGAAAGTCTAAAAGGGACTTGGACAGTCTTACGGATACTGAAAGTGATGGCACTTCTGAGCAAGATGGCCTTGATGTTCAAGGGAAAGATCTAAACCGTAAAGGCTTGTCAGTGAAAGCTGTGGAAGACGTACCACCTCAAGTCTCAGATGCCCGCCATAAAAGGAGAGGAGAGGCAGATATGGTGGAAAATGATGGGGAGAGATCCCCTAAGGAGAATGGTGAGCGAAGGAGCAATGGCGTTGCTGCAGTGGATTCTAAGTCTGAAAGAAGCTCGGAAAGACAACCTGATATTGTTGATGACCACCCTGGAAAATCTAGGAGTCGAAGCATTAGTCCTAGAAGGACGTTGAGTAAGAGTATGAGTATTAGTCCCAGGAAGAGTCGCAGCAAGAGCCATAGTGCTAGTCCAAAGCGAAGTATGAGCAGGAGTCGAAGTGTTAGTGGAAGCCCTCCTCGTGCACCATTGAGGAGCAGGAGCAGGAGCATCAGCAGAAGTCCTGTTCGAAATGGTAGCAGGAGCGTCAGCAGAACTCCTGTTAGAAATGGTAGCAAGAGCCCAGGTAGAAGTATCAGCAGGAGCCCAGATAGGGGAAGGAAAGGTAGGAGTGTCAGTAGAAGCCCATTACGAACCAGGCCTCAGAGAGGTAATAGCAGAAGCCCCTTGAGATCTAATCCACAAAGAAGTCCAAGCAGGAGCCCACCTAGAAGAGCCTCTAGAAAATCAATTAGTAGGAGTCCTGCAAGAGTTTCCAGAAGTGCGAGCAGAAGTCCAGTGAGGTCCTCTCGTCAGAGCTTGAGCAGAAGCTCAGGTAGGGCACCTTCTAGGAGAAGTATTAGTCCAAGTCCTCGAGCACCAGTTAGGAATCGAAAGAGCAACTCTAGGAGTCCTAGTCCCATTCGAAGGCCAAGGTCACCAGTATCTGATAGAGGGAGAAGTGCATCAAGAAGTGTTTCTCCAGAAGGGTCTCCAAAGCGCATCAGGAGGGGGCGTGGTTTTAGTGAGCGTTATTCATTTGCTCGAAGATACAGAACACCCTCTGCATCTCCTGTCAGGTCATACCGTTACGGTGGAAGAGTTGAACGTGACAGATATTCAAGTTACAGAAGATATTCTCCTAGGCGTTACCGAAGCCCTCCCAGAGGAAGATCTCCGCTAAGATACAGAAACAGGAGAAGCAGGACTCCCTCTGCATCCCGTAGTCCTCGTTACCGTAATCGTCGTTATAGCCGTAGCCGGAGCCCTATAAGGAGCCGTTCGCCAGTTGAGGGATCCAGGTCCCGTTTATCTCCTAGAGTAGTTAGGCGGAAATCTCCTTCAAGGAGCAGATCGCCATCAAAATCAAGGTCCCCCGGTGATTCACATTCCCCCAAAAGGACTAGCAGAGATAGGTCGAGGTCACCTTCTGGTAGCCCAGATGGGAAGAAGGGCCTGGTCTCTTATGGTGATGGATCTCCAGATTCAGAGAGGTGA 2451 45.94 MSTTQRIFNSHSIFGRVYDCSAILKLKEEKEEKKMTKKKNPLVFLDVSIDGDPREKMVFELFYDTAPKTAENFRALCTGEKGIGPKTGRPLHYKTSFFHRIIRGSMAQAGDFVKRDGTVGESIYGGKFPDEPPRLKHDGPGLLSMAIADRDTLGSHFLITFKANNHLDRKHVVFGKLVQGFDVLKKIEGVDVEDSVPTVTVKIVNCGEFSEEKRKMNKMKIGKNASSDDDSHEEKRRGKQKKPREKKRRKKRYHTSESDSSSDSEDSDSESGSDTDLSSSSSSESSSSDDRSRKRKRTSKRGRNRRGRRKDKRRDRKKRRHDKKSKRKSKRDLDSLTDTESDGTSEQDGLDVQGKDLNRKGLSVKAVEDVPPQVSDARHKRRGEADMVENDGERSPKENGERRSNGVAAVDSKSERSSERQPDIVDDHPGKSRSRSISPRRTLSKSMSISPRKSRSKSHSASPKRSMSRSRSVSGSPPRAPLRSRSRSISRSPVRNGSRSVSRTPVRNGSKSPGRSISRSPDRGRKGRSVSRSPLRTRPQRGNSRSPLRSNPQRSPSRSPPRRASRKSISRSPARVSRSASRSPVRSSRQSLSRSSGRAPSRRSISPSPRAPVRNRKSNSRSPSPIRRPRSPVSDRGRSASRSVSPEGSPKRIRRGRGFSERYSFARRYRTPSASPVRSYRYGGRVERDRYSSYRRYSPRRYRSPPRGRSPLRYRNRRSRTPSASRSPRYRNRRYSRSRSPIRSRSPVEGSRSRLSPRVVRRKSPSRSRSPSKSRSPGDSHSPKRTSRDRSRSPSGSPDGKKGLVSYGDGSPDSER 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2793756 2802553 - Hsped.10g02700.1 Hepe10g0270 580817

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0270 816 MobiDBLite consensus disorder prediction 778 796 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 413 434 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 700 724 - -
Hepe10g0270 816 Gene3D - 27 210 IPR029000 -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 682 696 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 611 627 - -
Hepe10g0270 816 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 45 207 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe10g0270 816 MobiDBLite consensus disorder prediction 214 238 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 570 603 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 214 816 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 648 664 - -
Hepe10g0270 816 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 39 209 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 294 327 - -
Hepe10g0270 816 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 35 216 - -
Hepe10g0270 816 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 169 184 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe10g0270 816 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 168 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe10g0270 816 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe10g0270 816 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 76 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe10g0270 816 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe10g0270 816 MobiDBLite consensus disorder prediction 465 517 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 372 401 - -
Hepe10g0270 816 SUPERFAMILY Cyclophilin-like 36 210 IPR029000 -
Hepe10g0270 816 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 44 208 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe10g0270 816 MobiDBLite consensus disorder prediction 436 456 - -
Hepe10g0270 816 MobiDBLite consensus disorder prediction 533 559 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0270 K09566 - - csv:101210345 820.076
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g2040 Hepe-Chr3:77879730 Hepe10g0270 Hepe-Chr10:2793756 2.89e-65 dispersed
Hepe09g1485 Hepe-Chr9:35233318 Hepe10g0270 Hepe-Chr10:2793756 3.68e-51 dispersed
Hepe10g0270 Hepe-Chr10:2793756 Hepe02g0569 Hepe-Chr2:5764401 6.45e-51 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g446 . . . . Bpe02g01238 . . . Cmo05g00413 Cmo12g00276 . Cma05g00402 . Car12g00307 . Cpe07g00284 . Bhi04g00994 . . . Hepe10g0270 . . . . . . . . . Cone4ag1806 Cone7ag1714 . . . . . Cme03g01642 Blo17g00026 Blo18g00035 Bda01g00993 . . . Bma01g01285 Bma02g00030 . . . . Cma12g00325 . Car05g00336 Cpe11g00342 . . . . . . . . Cla08g01312 Cam08g1772 Cec08g1354 Cco08g1474 Clacu08g1468 . Cre08g1255 Lsi08g01176 . Chy03g01144 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000569 2 5 4 4 2 3 5 3 3 3 3 3 5 3 2 5 3 6 6 3 3 4 3 3 1 2 2 8 4 2 105