Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0274 ATGGGGGCTCCATTCGAGGGAATAGTCAAAGATTTAAAGGGGAGGGCAGCCTGCTATAAGCAGGATTGGATATGTGCATTATGTTCAGGCGTCAGGATTTTAGCTCCTACTATGTACATCTTTTTCGCCTCTGCTCTTCCTGTTATTGCCTTTGGAGAACAACTTAGTAGGGATACAGGTGGAAGTTTGAGCACAGTGGAAACATTAGCCTCAACTGCGCTATGTGGAATTATCCACTCAATATTTGGGGGACAGCCTTTGCTGATTTTAGGAGTGGCAGAACCAACAGTTATTATGTATACTTACTTGTACAGCTTCTGCAAAAGCCGACCGGAGTTGGGAGGCAAGCTCTTTTTAGCCTGGGCTGGATGGGTGTGCATCTGGTCAGGATTCTTCCTGATCCTCCTTGCAATCTTTAATGCTTGCGACATCATCACCAAATTTACGAGAGTTGCAGGGGAATTATTTGGCATGCTCATTGCTGTTCTTTTCTTCCAAGAGGCAATAAAGGGATTGATCAGCGAATTCAAGATTCCCAAGTCAGAAGATCCAACACTATTGAAATTCCAATTTGAATGGTTGTATACAAATGGGTTGCTTGCTATCATTTTTTCCTCTGGTCTACTCTTCACAGCCCTGAAAAGCAGACGTGCAAGAACGTGGAAATATGGCACTGGCTGGTTTCGGAGTTTCATTGCAGACTACGGGGTTCTGCTTATGGTCGTGTTCTGGACAGCATTGTCTTACGCAGTTCCCAGCAAAGTTCCAGATGGAGTTCCAAGGAGACTCTTTTGTCCATTACTTTGGGAGCCAGCCTCATTGTACCACTGGACAGTAGTCAAGGACATGGGGAAGATTCCAGTGACTTACATCTTTGCTGCTTCTCTGCCAGCCGTGATGATAGCAGGCCTATACTTTTTTGACCATAGTGTTGCCTCACAAATGGCACAACAGAAAGAGTTTAATCTTCAAAATCCATCTGCATATCATTACGATGTCTTCTTGCTCGGGATTATGACTTTGATTTGTGGATTGCTTGGATTACCTCCTTCTAATGGTGTCCTCCCACAGTCCCCAATGCACACCAAGAGTCTCGCAGTGCTTAAACGGCAGCTAATTCGAAGAAAAATGGTAAAGAGAGCAAAGGAATGTATCAAACAAAAAGCGAGCAACTCTGAAATTTATGGAAAGATGCAGGCTGTGTTCATTGAAATGGACGCATCTCCAACTCCTAAAGAGCTAGAAACCTTGACGAATGCAGTAATGAATGCTGATGAAGGTGATCACAAGGGAAAATTCGACGCTGAGAAAAATATTGATCCTTATTTGCCTGTTCGTGTGAATGAGCAAAGGATGAGCAACTTGCTGCAGTCCTTCCTTGTGGCCGCATTAATTTTTGCTATCCCTATAATGAAAATGATACCCACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAATCAGTTCTGGGAAAGGATGTTGTTCCTCTTCATCACACCCAGTCGGCGTTTCAAGGTCTTGGAGGGGTCTCATTTATCTTTCGTTGAATCGGTGCCATTCAAGAGCATTGCTTCGTTTACCCTCCTTCAGTTTGCATATTTCTTGTTGTGCTTTGGTGTAACATGGATACCTGTAGCTGGGATCTTGTTCCCACTGCCATTTTTCCTCCTCATTAGCATAAGAGAGCATCTGCTCCCCAAGTTCTTCCAGCATAGCCATCTTCAAGAGCTAGATGCTTCAGAGTATGAGGAGATTACTGGTGGTCGACACCGCCCCATGAATCTCACAGTTCCGGAACAGGAGCCACAGGATTCAATTACGGATTCGAGTAACGAAGAATACTACGACGCCGAGATATTAGACGAGATGACAACTCATAGAGGAGAATTGAAGCTTAGAACTGTAAGTTACAATGTAGAAAGGTTCTTTCAGGTCAGAAACTAA 1965 43.97 MGAPFEGIVKDLKGRAACYKQDWICALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGSLSTVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYTYLYSFCKSRPELGGKLFLAWAGWVCIWSGFFLILLAIFNACDIITKFTRVAGELFGMLIAVLFFQEAIKGLISEFKIPKSEDPTLLKFQFEWLYTNGLLAIIFSSGLLFTALKSRRARTWKYGTGWFRSFIADYGVLLMVVFWTALSYAVPSKVPDGVPRRLFCPLLWEPASLYHWTVVKDMGKIPVTYIFAASLPAVMIAGLYFFDHSVASQMAQQKEFNLQNPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKRAKECIKQKASNSEIYGKMQAVFIEMDASPTPKELETLTNAVMNADEGDHKGKFDAEKNIDPYLPVRVNEQRMSNLLQSFLVAALIFAIPIMKMIPTSVLWGYFAYMAIDSLPGNQFWERMLFLFITPSRRFKVLEGSHLSFVESVPFKSIASFTLLQFAYFLLCFGVTWIPVAGILFPLPFFLLISIREHLLPKFFQHSHLQELDASEYEEITGGRHRPMNLTVPEQEPQDSITDSSNEEYYDAEILDEMTTHRGELKLRTVSYNVERFFQVRN 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2874624 2878303 - Hsped.10g02740.1 Hepe10g0274 580821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0274 654 Pfam HCO3- transporter integral membrane domain 4 178 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe10g0274 654 Pfam HCO3- transporter integral membrane domain 198 371 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe10g0274 654 Pfam HCO3- transporter integral membrane domain 445 587 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Hepe10g0274 654 Gene3D Helical hairpin bin 15 57 - -
Hepe10g0274 654 PANTHER ANION EXCHANGE PROTEIN 3 632 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Hepe10g0274 654 FunFam probable boron transporter 2 15 57 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2224 Hepe-Chr7:66604822 Hepe10g0274 Hepe-Chr10:2874624 1.21e-257 dispersed
Hepe10g0274 Hepe-Chr10:2874624 Hepe02g1390 Hepe-Chr2:17587505 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0274 K24194 - csv:101220188 1207.97