Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g0275 | ATGAGTAACTTTTCGATCATCGTTCCCCTGCCTTCGAACCTGATCACCGATCCGGCGAACCCAGACTGGATGAGCAAAGGCGACAACGCCTGGCAGATGACGGCGGCGACGCTGGTCGGACTACAGAGCGTGCCCGGTCTGATCATCCTCTACGGCGGCGCCGTAAAAAAGAAGTGGGCCATAAACTCTGCCTTCATGGCTCTGTACGCGTTCGCGTGCGTTCTGGTGTGTTGGGTCGGGTGGGGGTACCGGCTGTCGTTCGGCGACAAGCTGCTGCCGTTCTGGGGGAAGCTGAATGTGGCGTTGGATCAAGAGTTTCTGCTGGAACAAGCGTTCAGTGGGAAGCTGCCGTCGGCCACTATGGTGTTTTTTCAGTTCGTTTTTGCGGCGATTACTCTGGTTTTGATCGCCGGAGCTCTGCTTGGGAGGATGAATTTCTACGCTTGGATGCTGTTTGTGCCGCTTTGGCTGACGTTTTCTTACACTTTTGTGGCGTTTAGTATTTGGAGTCCTAATGGGTTTTTTTACAAGATGGGACTTATTGATTACTCCGGTGGATATGTCATTCATTTGTCCTCTGGAGTTGCTGGCTTTACGGCTGCCTATTGGGTGGGGCCACGTCTATCGAAAGACAGAGAAAGCTTCCCTCCGAACAACATTCTTCTGATGCTGGCCGGAGCCGGTTTGTTGTGGATGGGTTGGACCGGGTTCAACGGCGGAGACCCGTACGCCGCCAACATCGACGCCTCACTGGCGGTTCTGAACACCCACGTTTGCACCGCCACCAGCCTCCTCACTTGGCTCATCTTCGACATCGTCTTCTTCAGAAAGCCCTCCGTCATCGGCGCCGTCCAGGGAATGATCACCGGCCTTGTTTGCATCACCCCCGCCGCAGGAGTTGTTCAAGGATGGGCGGCCATTATAATGGGATTGCTATCAGGCTCGATCCCGTGGTTCACAATGATGGTGGTCCACAAGAAATCTGCCATCCTTCAAAAGGTTGACGACACAATGGCAGTGTTCCACACCCACGCCATCGCGGGCAGCTTGGGCGGCATTTTGAGCGGCATCTTCGCCGAGCCACGCCTCAACTTCGTCTACTATGGTGCCTACAACAAGTACATTGGCCTATTCTACGGCTTCAGCACAAGCCAAGTCAAACTCGGCTTTCGCCAGCTCGGTGTCCAACTCCTTGGAATCCTCTTCGTCACCATCCTAAACATCATCGTCACTAGCCTCATATGCGTCGCGCTCCAATACATTGTCCCCCTCCGAATGTCCGAGGAGGACATGGCCATCGGCGACGAGGCCGCCCATGGCGAAGAGGCCTATGCCATTTGGGGGCAGGGCGAGAAGATGGATTCTTCTAAGTATGATATTGAGATCCCAGTTACGACGAAGCATAGACATGCAGGCCATGTTGAAATGGCTTAA | 1434 | 54.32 | MSNFSIIVPLPSNLITDPANPDWMSKGDNAWQMTAATLVGLQSVPGLIILYGGAVKKKWAINSAFMALYAFACVLVCWVGWGYRLSFGDKLLPFWGKLNVALDQEFLLEQAFSGKLPSATMVFFQFVFAAITLVLIAGALLGRMNFYAWMLFVPLWLTFSYTFVAFSIWSPNGFFYKMGLIDYSGGYVIHLSSGVAGFTAAYWVGPRLSKDRESFPPNNILLMLAGAGLLWMGWTGFNGGDPYAANIDASLAVLNTHVCTATSLLTWLIFDIVFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAAIIMGLLSGSIPWFTMMVVHKKSAILQKVDDTMAVFHTHAIAGSLGGILSGIFAEPRLNFVYYGAYNKYIGLFYGFSTSQVKLGFRQLGVQLLGILFVTILNIIVTSLICVALQYIVPLRMSEEDMAIGDEAAHGEEAYAIWGQGEKMDSSKYDIEIPVTTKHRHAGHVEMA | 477 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2886008 | 2889519 | - | Hsped.10g02750.1 | Hepe10g0275 | 580822 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g0275 | 477 | Pfam | Ammonium Transporter Family | 30 | 444 | IPR024041 | GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro) | |
Hepe10g0275 | 477 | ProSitePatterns | Ammonium transporters signature. | 182 | 207 | IPR018047 | GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro) | |
Hepe10g0275 | 477 | FunFam | Ammonium transporter | 12 | 447 | - | - | |
Hepe10g0275 | 477 | PANTHER | AMMONIUM TRANSPORTER MEP2 | 22 | 456 | IPR001905 | GO:0005886(PANTHER)|GO:0008519(InterPro)|GO:0008519(PANTHER)|GO:0016020(InterPro)|GO:0072488(InterPro)|GO:0072488(PANTHER) | |
Hepe10g0275 | 477 | NCBIfam | ammonium transporter | 28 | 444 | IPR001905 | GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro) | |
Hepe10g0275 | 477 | Gene3D | Ammonium transporter AmtB like domains | 13 | 448 | IPR029020 | - | |
Hepe10g0275 | 477 | PRINTS | Rhesus blood group protein signature | 221 | 239 | IPR002229 | GO:0005886(InterPro) | |
Hepe10g0275 | 477 | PRINTS | Rhesus blood group protein signature | 252 | 274 | IPR002229 | GO:0005886(InterPro) | |
Hepe10g0275 | 477 | PRINTS | Rhesus blood group protein signature | 125 | 141 | IPR002229 | GO:0005886(InterPro) | |
Hepe10g0275 | 477 | SUPERFAMILY | Ammonium transporter | 23 | 426 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1639 | Hepe-Chr4:71733747 | Hepe10g0275 | Hepe-Chr10:2886008 | 1.60e-192 | dispersed | |
Hepe05g0062 | Hepe-Chr5:633934 | Hepe10g0275 | Hepe-Chr10:2886008 | 4.32e-184 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g0275 | K03320 | - | csv:101210590 | 882.863 |