Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0323 ATGACTGCACCCGTGTCGGTTGATGTGGGAAAGGGGAATGGGAAGAAGGGTATTGAGAATTTGGTTTCTGCTACTATGTCGTTGAAGGTTAGTTTAGAGAAATCTAGGGCTCTAGGGTTTGCGTTGCAGAAAGCTGGCCCGAGATTGGAGGAGATTAAACATAGATTGCCGACTTTAGAAGCCGCTGTTCGGCCTATTCGTGCTGATAAGGAAGCTTTAGTTGCCGTTGGTGGCCATATTAATCGCGCTGTTGGGCCGGCCGCGGCCGTGCTTAAGGTTTTTGATGCTGTTCATGGCCTTGAAAAGTCTCTGTTATCTGACCCGCGGAATGATCTCCCTGGTTATTTGTCTGTGTTGAAACGTATGGAGGAGGCATTGAGGTTTTTGGGAGATAACTGTGGACTGGCAATCCAGTGGTTGGAGGATATAGTTGAGTATTTGGAAGATAATACTGTTGCTGATGAGAGATATCTTGCGAGTTTGAAGAACTCGTTGAAGAATTTGAGGGATTTGCAGAGTGATGAGGAGAGGATTCGGCTTGATGGGGGGCTTTTGAATGCTGCTTTAGATAAACTAGAGAATGAGTTTAGGCGTCTTTTAATGGAGAACAGTGTGCCCCTTCCCATGTCGTCTTCTGCGTCGCTCGGTGAGCAAGCTTGCATTGCTCCATCTCCATTGCCTGTGAGTGTTATTCAGAAATTGCAGGCCATTCTTGGGAGATTGATTGCTAATAAACGACTTGAGAGATGCATATCCATCTATGTCGAAGTTCGTAGTTCTAATGTTAGGGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAAATATCGGTTTCTGAGTTCAATGATGTGCAGAGCATTGAGGGGTACATTGCAAAATGGGGAAAGCATTTGGAGTTTGCAGTGAAACACTTGTTTGAGGCTGAGTTCAAGCTTTGTAATGATGTTTTTGAGAGGATAGGATTGGATGTTTGGATGGGCTGTTTTGCAAAGATAGCAACTCAAGCAGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTAACAGAGAGCAAGAATGATCCTATTAAGCTATTGAAGTTGTTAGATATATTTGCATCCTTGAACAAACTGAGACTGGACTTCAATAGGCTTTTTGGCGGGACTGCGTGTTTGGAAATTCAAAACCTGACTAGAGATCTCATTAAGAGGGTTATTGATGGCGCAGCCGAGATTTTCTGGGAACTCCTAGTTCAGGTGGAGTTACAAAGGCAAAATTCTCCACCTTTAGATGGGGCAGTTCCAAGGTTGGTTAGCTTCATTATTGAATACAGTAATAAACTACTCAGTGATGATTATCGGCCGATCCTGACTCAAGCCCTCGTCATTCACCGGAGTTGGAAGAAAGAAAAGTTCCAAGAGGGTCTTCTTATCAGTGAGGTTATGAACCTCGTTAAAGCAATTGAGCAGAATCTGGAGACTTGGATAAAGGCTTATGAAGATTCTACCTTGTCAAATTTTTTCGCTATGAACAATCATTGGCATCTATACAAGCACCTCAAAGGAACGAAAGCCGGAGAACTAATGGGGGAGAAATTAAAGGAACATGAACAATACAAGGATTACTATGCTGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCTAGCCATTTAAGTAGGGAGGGTTTGATTATGTTCTCAGGTGGGCGAGCTACTGCCCGCGATCTCGTCAAGAAACGTCTAAAGACATTCAATGAAGCTTTTGAAGACATGTATAAGAAGCAGTCAAGCTGGATTATGATTGACAAAGAATTGAGGGAGAAGACATGCCAACTTATAGTTCAAACCATCGTTCCTGTATATCGCAGCTACATGCAGAATTATGGCCCCCTCGTCGAGCAAGATGCAAGTTCCAGTAAGTATGCGAAGTACACCGTGCAGAATCTGGAGAAAATGTTACTGACCCTTTTTCAGCCAAAGCCACTTAGGTTCAACAGCCTTAAAGTTAGGCAGACTAGTGAGAAATTCAGCAATGGCGCAGCAGATATTCGTCGTGCCAACTCCATGGCTATGTAA 2058 43.44 MTAPVSVDVGKGNGKKGIENLVSATMSLKVSLEKSRALGFALQKAGPRLEEIKHRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNTVADERYLASLKNSLKNLRDLQSDEERIRLDGGLLNAALDKLENEFRRLLMENSVPLPMSSSASLGEQACIAPSPLPVSVIQKLQAILGRLIANKRLERCISIYVEVRSSNVRASLQALDLDYLEISVSEFNDVQSIEGYIAKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGTACLEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNSPPLDGAVPRLVSFIIEYSNKLLSDDYRPILTQALVIHRSWKKEKFQEGLLISEVMNLVKAIEQNLETWIKAYEDSTLSNFFAMNNHWHLYKHLKGTKAGELMGEKLKEHEQYKDYYAAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSSWIMIDKELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDASSSKYAKYTVQNLEKMLLTLFQPKPLRFNSLKVRQTSEKFSNGAADIRRANSMAM 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3450110 3453469 - Hsped.10g03230.1 Hepe10g0323 580870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0323 685 Pfam Exocyst complex component Exo70 N-terminal 85 200 - -
Hepe10g0323 685 PANTHER EXOCYST COMPLEX PROTEIN EXO70 84 653 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Hepe10g0323 685 FunFam Exocyst subunit Exo70 family protein 140 657 - -
Hepe10g0323 685 Pfam Exo70 exocyst complex subunit C-terminal 293 648 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Hepe10g0323 685 SUPERFAMILY Cullin repeat-like 90 651 IPR016159 -
Hepe10g0323 685 Gene3D Exocyst complex component Exo70 138 657 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1372 Hepe-Chr3:70362827 Hepe10g0323 Hepe-Chr10:3450110 1.03e-111 dispersed
Hepe03g1374 Hepe-Chr3:70370368 Hepe10g0323 Hepe-Chr10:3450110 3.53e-219 dispersed
Hepe10g0323 Hepe-Chr10:3450110 Hepe01g0852 Hepe-Chr1:72523176 1.32e-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0323 K07195 - csv:101207478 1253.04