Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0358 ATGGCTAAAATTGCATTGGGAAGCATAGGCGAGGCCACGCAGCCCGACTGCATCCGAGCCCTCGTCGTCGAGTTCATTGTCACCTTCCTCTTCGTCTTCGGTGGGGTCGGAGCAGCCATAGCTTCCAATACATTATTGGCAAACACACTAGTGGGTTTGTTCGCGGTCGCTGTCGCACATGCGTTTGTCGTGGCTGTGATGATCTCCGCCGGCCACATTTCCGGTGGCCACCTCAACCCGGCCGTCACTCTTGGTCTCCTTTTCGGTGGTCACATTACAGTCGTCCGATCTGCTCTATATTGGATCATTCAGTTGCTAGCAGCTACGGCTGCTAGCTTTCTGTTAACGTACCTCACCGGAGGCTTGCCCACACCAGTGCATACATTAGCAAGTGGAGTTGGCTATCTTCAAGGAGTGATATGGGAGATTATTCTCACATTTTCCTTGCTGTTCACTGTGTATGGAACAATGGTAGACCCAAAGAAGGGAGCTCTTGATGGGTTGGGGCCATTGTTGACTGGGTTTGTGGTGGGAGCCAATATCTTGGCTGGTGGGGCTTTTTCTGGAGCTTCAATGAACCCAGCAAGATCATTTGGGCCTGCTTTGGTGGCTGGAGACTGGACTGACCATTGGGTTTACTGGGTTGGGCCTCTTATTGGTGGTGGGCTTGCTGGATTCATCTATGAAAATTTCTTCATTGACAGGTCTCATGTCCCTCTACCTAGGGTAGAAGAGGCCTATTAG 744 51.34 MAKIALGSIGEATQPDCIRALVVEFIVTFLFVFGGVGAAIASNTLLANTLVGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLFGGHITVVRSALYWIIQLLAATAASFLLTYLTGGLPTPVHTLASGVGYLQGVIWEIILTFSLLFTVYGTMVDPKKGALDGLGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVAGDWTDHWVYWVGPLIGGGLAGFIYENFFIDRSHVPLPRVEEAY 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3917491 3918592 + Hsped.10g03580.1 Hepe10g0358 580905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0358 247 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe10g0358 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe10g0358 247 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe10g0358 247 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe10g0358 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe10g0358 247 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe10g0358 247 FunFam Probable aquaporin TIP1-1 2 245 - -
Hepe10g0358 247 PANTHER AQUAPORIN-8 1 238 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Hepe10g0358 247 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe10g0358 247 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Hepe10g0358 247 Gene3D Glycerol uptake facilitator protein. 2 241 IPR023271 -
Hepe10g0358 247 SUPERFAMILY Aquaporin-like 13 240 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1681 Hepe-Chr6:67823776 Hepe10g0358 Hepe-Chr10:3917491 5.28e-78 dispersed
Hepe07g2308 Hepe-Chr7:67404886 Hepe10g0358 Hepe-Chr10:3917491 5.17e-71 dispersed
Hepe08g0886 Hepe-Chr8:8024237 Hepe10g0358 Hepe-Chr10:3917491 7.17e-26 dispersed
Hepe10g0358 Hepe-Chr10:3917491 Hepe10g0361 Hepe-Chr10:3930169 4.42e-170 proximal
Hepe10g0358 Hepe-Chr10:3917491 Hepe03g1531 Hepe-Chr3:72168875 2.12e-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0358 K09873 - csv:101205380 432.95