Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g0364 | ATGAGTAGTAAGGAAGTTATTGATCTTCTTCGAACCTCCGAAACGGAGTCGAAGAAAATCAAACGCATCAGAAACAACGACGACAACAACAACAACGATCACAACAACGTCGAGAATAACAATAAATCGAACAACAACAGCAAACACCCGGTTTACCGGGGAGTTCGAATGAGAAACTGGGGGAAATGGGTGTCGGAAATTCGAGAGCCAAGAAAGAAATCCCGCATTTGGTTGGGAACTTTCCCCAGCCCTGAAATGGCCGCACGTGCGCACGACGTCGCCGCCGTGAGTATCAAAGGAAACGCCGCAATTCTCAATTTCCCTGACTTGGTTCACCTCCTCCCCCGCCCTGCCTCTCTCGCCCCTCGTGACGTCCAAGCCGCCGCTCACAAAGCTGCCCACATGCACAATTTTTCATCCTCCTCCGCCGCCGTTGTCGCCGCCGTGGACGACGGCGATGACGACGGCGAGTCCGATGAGCTGACGGAGATCGTCCAGCTGCCGAGTTTGGGAACGAGTAACTACGAGGAGTACTGTGGGGAGTTTGTTTTTGTGGATTCGGCGGCGGCGGAGGAGGAGTATTCAGGGTGGCTTAATTACCCGCCGCCGTGGCTGCAGAGCTTGGAGATGGAGGAGGAGGAGAATAATGAGAATGGTAAGTTGGGAGGAATGGGATTAATATCAACCACCAATTTCAAAGGATTGTTTTGGGATTATTGA | 720 | 52.22 | MSSKEVIDLLRTSETESKKIKRIRNNDDNNNNDHNNVENNNKSNNNSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAAVSIKGNAAILNFPDLVHLLPRPASLAPRDVQAAAHKAAHMHNFSSSSAAVVAAVDDGDDDGESDELTEIVQLPSLGTSNYEEYCGEFVFVDSAAAEEEYSGWLNYPPPWLQSLEMEEEENNENGKLGGMGLISTTNFKGLFWDY | 239 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3964166 | 3964885 | + | Hsped.10g03640.1 | Hepe10g0364 | 580911 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g0364 | 239 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 36 | 185 | IPR051032 | - | |
Hepe10g0364 | 239 | MobiDBLite | consensus disorder prediction | 32 | 50 | - | - | |
Hepe10g0364 | 239 | MobiDBLite | consensus disorder prediction | 18 | 52 | - | - | |
Hepe10g0364 | 239 | FunFam | Ethylene-responsive transcription factor 2 | 50 | 109 | - | - | |
Hepe10g0364 | 239 | SUPERFAMILY | DNA-binding domain | 51 | 109 | IPR016177 | GO:0003677(InterPro) | |
Hepe10g0364 | 239 | CDD | AP2 | 52 | 110 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0364 | 239 | SMART | rav1_2 | 51 | 114 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0364 | 239 | Gene3D | AP2/ERF domain | 51 | 109 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0364 | 239 | Pfam | AP2 domain | 50 | 100 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0364 | 239 | PRINTS | Ethylene responsive element binding protein signature | 74 | 90 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0364 | 239 | PRINTS | Ethylene responsive element binding protein signature | 52 | 63 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g0364 | 239 | ProSiteProfiles | AP2/ERF domain profile. | 51 | 108 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1438 | Hepe-Chr2:18336072 | Hepe10g0364 | Hepe-Chr10:3964166 | 2.20e-44 | dispersed | |
Hepe06g1118 | Hepe-Chr6:59915307 | Hepe10g0364 | Hepe-Chr10:3964166 | 8.77e-42 | dispersed | |
Hepe07g0192 | Hepe-Chr7:1719533 | Hepe10g0364 | Hepe-Chr10:3964166 | 5.08e-32 | dispersed | |
Hepe07g0193 | Hepe-Chr7:1724985 | Hepe10g0364 | Hepe-Chr10:3964166 | 5.08e-32 | dispersed | |
Hepe08g2612 | Hepe-Chr8:68003145 | Hepe10g0364 | Hepe-Chr10:3964166 | 1.51e-45 | dispersed | |
Hepe09g0797 | Hepe-Chr9:7758930 | Hepe10g0364 | Hepe-Chr10:3964166 | 2.05e-53 | dispersed | |
Hepe10g0364 | Hepe-Chr10:3964166 | Hepe10g1428 | Hepe-Chr10:50939558 | 5.36e-21 | dispersed | |
Hepe06g0322 | Hepe-Chr6:11447789 | Hepe10g0364 | Hepe-Chr10:3964166 | 3.46e-29 | transposed | |
Hepe01g2221 | Hepe-Chr1:86907017 | Hepe10g0364 | Hepe-Chr10:3964166 | 1.59e-68 | wgd | |
Hepe10g0364 | Hepe-Chr10:3964166 | Hepe03g1526 | Hepe-Chr3:72132703 | 4.54e-45 | wgd | |
Hepe10g0364 | Hepe-Chr10:3964166 | Hepe04g1449 | Hepe-Chr4:70152923 | 1.39e-18 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56448 | PF00847 | AP2 | 3.80E-13 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g0364 | K09286 | - | csv:101206242 | 244.973 |