Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g0381 | ATGGAAGCTCCTGAATATTTCCAAATCAATACCTACTGCTCCCAATTCGCCACCCACTCCTCCGACAACGACGCCGCCGCCGCCACCGGAGCTGAGCATTTCATCGTCGAGGAACTTCTCGATTTCTCCAACCACGACGACGGAGGAGGATTCTTCAATAATACTAACAATAATAATAATGCCACCTGCTTCCTCACTGGAAAGTCGGCCGATTCCTCCGCCGTTACGGTGGTTGAGAGCTGCAATTCCTCGTCGTTTTCCGGTTGCGAACCTAATTCCTTCTTTGCGGATTCTAATTTAGTCGAAAGCAATTTCACCAACGAACTCTGCGTTCCGTTCGACGATATAGCTGATTTGGAATGGCTTTCAAATTTAGTAGAGGAATCATTTTCCAGCGAGGATTTGCAAAAGTTAGAACTCATCTCCGGAGTCAAAGTCAAACCCGACGAACCCCCCCAGTCCCGACAGCCCAGCACCGCCACCCACAGCCGAAACGCCGCCGCAATCTTCAAACCGGACATCGTTTCGGTTCCGGCGAAGGCACGTAGCAAACGCTCACGCGCCGTCCCATCCAATTGGAACAACTCCCGCCTCCTCCCTCTCTCTCCGACCACCTCCTCGTCGGAATCCGACATCGCCGTTGTCGTCACCACCGCCGGACCACCACACCCAGTCAAAAAGGTCCCTCCAAAGGTGACGACGGCGAAGAAGAAGGACTCCCCGGAGGTGGCCGGAGTGTCCGCCGGAGAGGGGCGGAAGTGCATGCACTGCGCCACCGACAAAACGCCGCAGTGGCGGACGGGCCCAATGGGCCCAAAGACGCTCTGTAACGCTTGCGGCGTTCGGTACAAATCCGGCCGCCTGGTGCCGGAGTACCGACCCGCCGCCAGCCCCACATTCGTCCTCACGAAACACTCGAATTCCCACCGGAAAGTGCTGGAGCTCCGGCGGCAGAAGGAGGTTCTCAAAGCACAGCAACAGCAACCGCAACCATTGATTTTGGATCATCATCATCATCAGGATATGATCTTTGACTCATCCAACGGTGACGATTATCTCATCCATCAACATGTGGGGCCCGATTTCCGGCAGCTGATCTGA | 1101 | 55.22 | MEAPEYFQINTYCSQFATHSSDNDAAAATGAEHFIVEELLDFSNHDDGGGFFNNTNNNNNATCFLTGKSADSSAVTVVESCNSSSFSGCEPNSFFADSNLVESNFTNELCVPFDDIADLEWLSNLVEESFSSEDLQKLELISGVKVKPDEPPQSRQPSTATHSRNAAAIFKPDIVSVPAKARSKRSRAVPSNWNNSRLLPLSPTTSSSESDIAVVVTTAGPPHPVKKVPPKVTTAKKKDSPEVAGVSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEVLKAQQQQPQPLILDHHHHQDMIFDSSNGDDYLIHQHVGPDFRQLI | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4185213 | 4187676 | - | Hsped.10g03810.1 | Hepe10g0381 | 580928 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g0381 | 366 | Pfam | GATA zinc finger | 254 | 288 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe10g0381 | 366 | MobiDBLite | consensus disorder prediction | 146 | 165 | - | - | |
Hepe10g0381 | 366 | ProSitePatterns | GATA-type zinc finger domain. | 254 | 279 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe10g0381 | 366 | ProSiteProfiles | GATA-type zinc finger domain profile. | 248 | 284 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe10g0381 | 366 | FunFam | GATA transcription factor | 246 | 330 | - | - | |
Hepe10g0381 | 366 | SMART | GATA_3 | 248 | 298 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe10g0381 | 366 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 250 | 312 | - | - | |
Hepe10g0381 | 366 | CDD | ZnF_GATA | 253 | 300 | IPR000679 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe10g0381 | 366 | PIRSF | Txn_fac_GATA_plant | 15 | 343 | IPR016679 | GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0045893(InterPro) | |
Hepe10g0381 | 366 | Gene3D | - | 247 | 329 | IPR013088 | GO:0006355(InterPro)|GO:0008270(InterPro) | |
Hepe10g0381 | 366 | MobiDBLite | consensus disorder prediction | 220 | 247 | - | - | |
Hepe10g0381 | 366 | PANTHER | GATA TRANSCRIPTION FACTOR | 33 | 320 | IPR051140 | GO:0005634(PANTHER)|GO:0030154(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g1433 | Hepe-Chr2:18234531 | Hepe10g0381 | Hepe-Chr10:4185213 | 8.37e-74 | dispersed | |
Hepe03g1519 | Hepe-Chr3:72079978 | Hepe10g0381 | Hepe-Chr10:4185213 | 4.42e-66 | dispersed | |
Hepe04g1570 | Hepe-Chr4:71201897 | Hepe10g0381 | Hepe-Chr10:4185213 | 5.45e-29 | dispersed | |
Hepe08g0974 | Hepe-Chr8:9152296 | Hepe10g0381 | Hepe-Chr10:4185213 | 9.34e-34 | dispersed | |
Hepe09g1689 | Hepe-Chr9:51116144 | Hepe10g0381 | Hepe-Chr10:4185213 | 7.08e-11 | dispersed | |
Hepe01g2218 | Hepe-Chr1:86878927 | Hepe10g0381 | Hepe-Chr10:4185213 | 3.81e-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56449 | PF00320 | GATA | 1.90E-15 | CL0167 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g0381 | - | - | - | 0.0 |