Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0383 ATGTCTAGAATTTCACTGCCATTTCTCAGAACCCTGCTCCTTGTTTACCTCTTCTCCTTCATCTCCAACTACATACCATTCTATGTAAGTTCACAAACTGTCAATGCAGACCAAGCCATCTTGCTTGATCTTAAAGAGCAATGGGGGAATCCCCCGTCTCTCCGGTTATGGAACTCCTCATCCTCGCCCTGCAATTGGCCCGAGGTCGTCTGTAGAGACGGCACCGTCAGCAGAATCTCCCTCAGAAACAAAAATATCACTGGAAAGATCCCAATTGTCATCTGTAACCTGCAAAGCCTCACTGAGCTTGATCTTTCATGGAACTACATCCCTGGTGAGTTCCCTGAAGTTCTATACAACTGTTCCAAGCTCGAGTATCTCGATCTTTCGGGAAACTATTTTGTGGGTTCAATACCGCAAGACATAGACCGACTTCAAACTCTGAAGTACATGGACCTTAGCGCCAACAACTTCTCAGGCGGTTTTCCAGCGGCACTAGGCCGATTGCCAAATTTGAGAACTTTGAACATTTACAGAACTCAGGGCAATGGCACATTGCCAGCTGAAATTGGCAACTTGTCCAATCTTGAAACTTTGAGCATGGCATATAACACTTTGCTTGTCCCATCGCCAATACCACAGGCTTTCGGGAAACTGAAGAAGTTGAAGTATGTGTGGATGACAAAGTCCAATTTGATCGGCGAAATCCCAGAAAGCTTATCTGATCTTTTGAGCCTTGAGCACTTGGACTTATCCAGCAACAACTTGGTAGGCTCTGTTCCTGCTAGGCTGTTCTCTTTGCAGAATTTAAGCAACTTATATCTTTACCAGAATCAATTGTCGGGTGAGATACCTAAATCAATCCGAGCATCAAATTTACTCAATGTAGACCTCTCTATGAACAATTTAAGCGGCACAATCCCTGAAGATTTTGGGAAGTTAAAAAAGTTGCAGGTCCTCAACTTGTTTGCAAATCATTTGTCTGGTGAGATTCCAGGTTGTCTAGGCCTAATAACTACGCTGAAAGGTTTTCGTGTTTTCAACAACAGCTTAACCGGGGGCTTGCCACAAGAATTGGGTCTGCACTCAAATTTGGAAGCATTGGAGGTTTCAATGAATAAACTAAGTGGTTCGTTACCTGAACATCTCTGTAAAAATGGCGTCTTACAGGGTGTAGTTGTTTTTTCCAACAATCTTACCGGTGAATTGCCAAGAGGGCTTGGCAATTGCAGGACCCTGAGCACAGTCCAGCTTTCAAATAACAACTTTTCTGGCGAAATACCTCCAGGACTTTGGACTACTTTCAATCTATCAAGCATAATGTTGGATGGAAATTCATTCTCAGGCAAGTTACCAGATAACTTATGGAATCTCTCGAGACTGTCAATAAATAACAACAAATTTTGGGGTCAAATTCCTGAAAATGTGTCAGCATGGCAAAACTTGGTTGTGTTCGAGGCAAGCAACAATCAGCTTTCTGGTGAACTTCCAGAGGGATTGACAAGCCTTCCTCGTCTTACCACACTCATATTGAATGGAAATCAACTCTCTGGCCAACTTCCATCGACAATCGGTTCGTGGGAATCATTAAACACTCTAAATCTCTCAAGAAATGATCTTTCGGGTAATATTCCAGCAGCGTTTGGTTCCCTTCCTAACCTCATTTACCTGGATTTATCAGCTAATAACTTCTCAGGTGAAATCCCACCTGAAATTGGCCACTTAAGACTGGCTTCCCTCAACTTGTCTTCTAATCAGCTTTCAGGGAAAATCCCAGACGAGTACGAGAATATAGCGTACGGAAGAAGTTTCTTGAACAACCCCAAACTATGTACCACCGCCGATGTACTTGACCTTCCAAACTGTTACTCCAGACAAAGAGATTCAAAAGATCAGTCCTCTAAATATCTTCCCCTCATTCTAGCTCTCATTGTCACCTTGCTCATAATTGCTTTACTATGGATCTTCATCCTATATAGAAGTTATTGCAAAAAGGATGAAAGATGCCACCCTGACACATGGAAGCTCACTTCATTCCAGAGATTGGAATTCACAGAAGCAAATATCGTGTCAAACTTGACAGAAACTAACCTGATCGGAAGTGGTGGATCCGGCAAAGTGTATTGCATAGATATCAACCATGCTGGATATTATGTTGCTGTCAAAAGGATTTGGAGTAACAAGAAGTTAGATCAAAAGCTTGAGAAAGAATTTCAAGCAGAAGTTCAAATACTAAGCTCAATTCGGCATTCAAACATAGTGAAGTTGTTATGCTGCGTCTGGAACGAAAATTCAAAGCTCTTAGTCTATGAATACATGCAAAACCATAGTCTAGATAAGTGGCTTCATAAAAGGAAGAAAAGGTTAAGGGCGGCTGCAATGGATTTTGTTGATCAATTTGTCTTAGACTGGCCGAGGAGGTTGCAGATTGCTATTGGAGCTGCACAAGGCCTCAGTTATATGCACCATGATTGCTCTCCACCGATCATTCATCGAGATGTGAAGTCAAGTAACATCTTATTAGACCGCGAGTTCGAGGCAAGGATAGCAGATTTTGGGCTGGCCAAGATGCTGGCCAGGCAGGGAGAGCTCCACACCATGTCTGCAATAGCAGGATCTTTCGGCTATATAGCCCCAGAGTATGCGTATACAATGAAAGTCAATGAGAAGATTGATGTCTATAGCTTTGGGGTTGTACTCCTGGAACTCACAACAGGAAGAAAGCCTAACTGTGGAGATGAGCACACAAGCCTAGCAGAATGGGCATGGCAGCAATATAGTGAGGGAAAGCCTATTACTGATGCTCTTGATGAGAAAATCAGAAACACATGCAATTTGGAAGAGATGACTACTCTATTCAAACTTGGTCTAATTTGTACAAGCACATTACCTGAAATACGACCTTCGATGAAGGAGGTTCTGCATATTCTACGCCAATGCAGCCCTCCCGAGGATTGTGATAGGAGAAAGAATGCTGGTGAATTTGATGCTGTTCCCCTCCTTGGTACTCCTCTATGA 3018 42.84 MSRISLPFLRTLLLVYLFSFISNYIPFYVSSQTVNADQAILLDLKEQWGNPPSLRLWNSSSSPCNWPEVVCRDGTVSRISLRNKNITGKIPIVICNLQSLTELDLSWNYIPGEFPEVLYNCSKLEYLDLSGNYFVGSIPQDIDRLQTLKYMDLSANNFSGGFPAALGRLPNLRTLNIYRTQGNGTLPAEIGNLSNLETLSMAYNTLLVPSPIPQAFGKLKKLKYVWMTKSNLIGEIPESLSDLLSLEHLDLSSNNLVGSVPARLFSLQNLSNLYLYQNQLSGEIPKSIRASNLLNVDLSMNNLSGTIPEDFGKLKKLQVLNLFANHLSGEIPGCLGLITTLKGFRVFNNSLTGGLPQELGLHSNLEALEVSMNKLSGSLPEHLCKNGVLQGVVVFSNNLTGELPRGLGNCRTLSTVQLSNNNFSGEIPPGLWTTFNLSSIMLDGNSFSGKLPDNLWNLSRLSINNNKFWGQIPENVSAWQNLVVFEASNNQLSGELPEGLTSLPRLTTLILNGNQLSGQLPSTIGSWESLNTLNLSRNDLSGNIPAAFGSLPNLIYLDLSANNFSGEIPPEIGHLRLASLNLSSNQLSGKIPDEYENIAYGRSFLNNPKLCTTADVLDLPNCYSRQRDSKDQSSKYLPLILALIVTLLIIALLWIFILYRSYCKKDERCHPDTWKLTSFQRLEFTEANIVSNLTETNLIGSGGSGKVYCIDINHAGYYVAVKRIWSNKKLDQKLEKEFQAEVQILSSIRHSNIVKLLCCVWNENSKLLVYEYMQNHSLDKWLHKRKKRLRAAAMDFVDQFVLDWPRRLQIAIGAAQGLSYMHHDCSPPIIHRDVKSSNILLDREFEARIADFGLAKMLARQGELHTMSAIAGSFGYIAPEYAYTMKVNEKIDVYSFGVVLLELTTGRKPNCGDEHTSLAEWAWQQYSEGKPITDALDEKIRNTCNLEEMTTLFKLGLICTSTLPEIRPSMKEVLHILRQCSPPEDCDRRKNAGEFDAVPLLGTPL 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4209839 4213579 + Hsped.10g03830.1 Hepe10g0383 580930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0383 1005 Pfam Leucine rich repeat 529 587 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Gene3D Transferase(Phosphotransferase) domain 1 773 996 - -
Hepe10g0383 1005 SMART LRR_typ_2 97 121 IPR003591 -
Hepe10g0383 1005 SMART LRR_typ_2 243 267 IPR003591 -
Hepe10g0383 1005 SMART LRR_typ_2 193 218 IPR003591 -
Hepe10g0383 1005 SMART LRR_typ_2 314 337 IPR003591 -
Hepe10g0383 1005 SMART LRR_typ_2 503 527 IPR003591 -
Hepe10g0383 1005 SMART LRR_typ_2 551 575 IPR003591 -
Hepe10g0383 1005 SUPERFAMILY RNI-like 292 623 - -
Hepe10g0383 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 34 191 - -
Hepe10g0383 1005 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524(InterPro)
Hepe10g0383 1005 Gene3D Ribonuclease Inhibitor 457 528 IPR032675 -
Hepe10g0383 1005 Gene3D Ribonuclease Inhibitor 145 210 IPR032675 -
Hepe10g0383 1005 Gene3D Ribonuclease Inhibitor 211 386 IPR032675 -
Hepe10g0383 1005 Gene3D Phosphorylase Kinase; domain 1 662 772 - -
Hepe10g0383 1005 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 192 288 - -
Hepe10g0383 1005 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Pfam Leucine Rich Repeat 99 121 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Pfam Leucine Rich Repeat 245 266 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Pfam Leucine Rich Repeat 436 458 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Pfam Leucine Rich Repeat 413 432 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Pfam Leucine Rich Repeat 505 526 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 Pfam Leucine Rich Repeat 269 289 IPR001611 GO:0005515(InterPro)
Hepe10g0383 1005 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 289 383 - -
Hepe10g0383 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0383 1005 Pfam Protein kinase domain 695 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0383 1005 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 31 980 IPR050647 -
Hepe10g0383 1005 FunFam Kinase family with leucine-rich repeat domain-containing protein 773 994 - -
Hepe10g0383 1005 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Hepe10g0383 1005 FunFam Receptor-like protein kinase HSL1 673 772 - -
Hepe10g0383 1005 SUPERFAMILY L domain-like 44 384 - -
Hepe10g0383 1005 SUPERFAMILY Protein kinase-like (PK-like) 686 977 IPR011009 -
Hepe10g0383 1005 Gene3D Ribonuclease Inhibitor 387 456 IPR032675 -
Hepe10g0383 1005 Gene3D Ribonuclease Inhibitor 529 611 IPR032675 -
Hepe10g0383 1005 Gene3D Ribonuclease Inhibitor 36 144 IPR032675 -
Hepe10g0383 1005 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 388 626 - -
Hepe10g0383 1005 ProSiteProfiles Protein kinase domain profile. 693 978 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0383 1005 SMART serkin_6 693 1001 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1890 Hepe-Chr7:62523144 Hepe10g0383 Hepe-Chr10:4209839 7.23e-83 dispersed
Hepe09g0815 Hepe-Chr9:7965477 Hepe10g0383 Hepe-Chr10:4209839 1.61e-140 dispersed
Hepe10g0383 Hepe-Chr10:4209839 Hepe02g1339 Hepe-Chr2:16921931 1.84e-61 dispersed
Hepe10g0383 Hepe-Chr10:4209839 Hepe04g1879 Hepe-Chr4:73725561 4.82e-82 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73166 PF00069 Pkinase 8.70E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0383 - - - 0.0