Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0394 ATGGCTTTTCACTCAGCTTTCTTTCTTCTTCTTTTGTTCCTCACTTCCTCCATTTCTTCTTCTTCTCAAGCTCTTACTACTACTACTACTACTACCAATCAGTCTCAGTTCTTCTTTCTCATGCAAAACACTGCCTCAGGAAAGTTCCTGTCTGATTGGGATCTTTCAGGAGGCAAATCCTTCTGCAACTTCTCTGGAATCCAGTGCAATGACCGAGCTAGCGTTGTTGGGATTGACATCTCTGGCCAGTCTCTCTCTGGTGGTTTCCCTGAAGATGTATGCTCTTACCTGCCAGAGCTGAAAGTTCTTCGTCTCGCTGGTACTGGTTTTCGAGGACGTTTTCCCTCAGGAATCACCAACTGCTCTCTCCTTGAAGAGCTTGACATGAGCTCTTTGTATCTCAATGGAACAATCCCGGAGTTATCGCAAATGAACCAACTGCGGGTACTCGACTTATCGTACAATTCCTTCACCGGTGACTTTCCCATGTCGGTTTTCGACCTTGTTAATCTCGAGGTGCTGAATTTCAATGAGAATTACAACCTCAACTTGTGGAAGTTGCCTGAGAACATCTCCAGCCTGAAGAAGCTGAAATCTATGGTCTTGACAACCTGTATGTTAGACGGCGAAATCCCGCGATCCATAGGGAACATGACATCTCTTGTTGATCTTGAACTCAGTGGGAACTTTCTCAAGGGAGAGATTCCAAAAGAAATCTCTTTGCTGAAGAACTTGCAACAACTTGAACTATATTACAATGAACTCACAGGAAACATACCAGAGGAGCTTGGGAATCTAACAGAGCTTGTGGACGTGGACATGTCAGTGAACCTTTTGACAGGAGAGCTTCCAGAATCTATTTGCAAACTCCCCAAGCTTAAAGTTCTACAGATTTACAACAATAGCCTCACAGGAGAGATTCCAAGTGTACTAGCCAACTCAACAACACTCACTATGCTATCACTTTATGACAATTTTCTTATAGGACAGATTCCGCAAAAGTTGGGGAAGTTCTCACCAATGATTGTCCTTGACTTGTCGGAAAATCGCCTGTCGGGGCCATTGCCATTGGATATTTGCAGAGGGGGAAAATTGCTCTACTTTCTTGTCCTGGAAAACATGCTTTCTGGAGAAATACCAGCAAGTTTTGCTGAATGCAGGTCACTTTTAAGGTTTAGGATTAGTTTCAATCAGTTGGTGGGCACAATTCCTGAAGGAGTTTTGGGTCTCCCCCATGTTTCAATTATTGATGTTGCTCATAATAATCTCACTGGTTCCATTTCAAATTCAATCTCACAGGCAAAAAACCTCTCAGAATTGTTCTTGCAAAGAAACAGGATTTCTGGAGTTGTACCGCCGGAGATTTCAGGAGCAACCAATCTGGTGAAGCTTGATCTCAGCAACAATCTTCTCTCCGGCCCGGTGCCGTCGGAGATTGGCAATCTGAAGAAACTTAATCTGGTGATGCTACAAGAAAACCAGCTGGATTCTTCAATCCCCAGCTCATTCACATCGTTGAAATCCCTCAACGTTCTTGATCTTTCTAACAATCTTTTATCCGGGAAAATCCCAGAAAGTTTGAGTGAATTGTTCCCAACTTCTTTGAATTTTTCGAACAATCAACTTTCAGGTCCAATTCCTCTGTCTTTGATCAAACAAGGCTTGGCCGATAGCTTTTCTGGCAACCCAAACCTATGTGTTCCACCGGCGTATTTCATTTCACCGGATCAGAAATTCCCCGTTTGTTCACATTCTTCCTTTACAAAACGTCTAAATTTCATATGGGCAATCGGAATTCCATTGCTCATCTTCTTCACCGGCGCCGTCCTGTTTCTAAAACGCCGAATCACAACCAGAAAGACAGCAGAGATCGAAAACAAAGAAACCCTCTCCTCGTCATTCTTCCATTTGCAGAGCTTCGACCAAAACTTGATTCTCGAAGCCATGGTGGAAAAGAACATCGTGGGTCACGGCGGATCGGGAACTGTCTACAAAATCGAGCTCGGAAACGGAGAAACCGTCGCTGTGAAGAGGCTATGGAATCGAAGAGCAAAACACCTCTTCGACAAGGAATTGAAAACAGAAGTCGAAACCCTAGGAACTATCCGGCACAAGAACATCGTGAAACTCTATAGCTACTTTTCGGGTCTAAATTGCAGCCTTCTGGTTTACGAATACATGTCAAACGGCAATTTATGGGACGCGCTTCATAAAGGGTTGATTCATCTCGATTGGCCCACGCGCCACCGCATCGCAGTGGGGATCGCCCAAGGCCTCGCCTATCTCCACCACGACCTCTCCCCGCCGATAATCCACAGAGACATCAAATCCACAAACATTCTATTAGATGCAAGTTACCAACCCAAAGTAGCAGATTTCGGCATAGCCAAAGTTCTACAAGGAAGCAAAGACTCAACCAACTCTGTAATCGCAGGGACTTACGGCTATTTGGCCCCTGGTAAGTTTCTTAATCGATTTCATTTCCAATTTCAGAAAGAAAAAACAAACAGCCCTAATTCATTTGTTATCTTACAGAATATGCATATTCATCGAAAGCAACAACCAAATGCGATGTGTACAGTTTTGGGGTGA 2592 43.98 MAFHSAFFLLLLFLTSSISSSSQALTTTTTTTNQSQFFFLMQNTASGKFLSDWDLSGGKSFCNFSGIQCNDRASVVGIDISGQSLSGGFPEDVCSYLPELKVLRLAGTGFRGRFPSGITNCSLLEELDMSSLYLNGTIPELSQMNQLRVLDLSYNSFTGDFPMSVFDLVNLEVLNFNENYNLNLWKLPENISSLKKLKSMVLTTCMLDGEIPRSIGNMTSLVDLELSGNFLKGEIPKEISLLKNLQQLELYYNELTGNIPEELGNLTELVDVDMSVNLLTGELPESICKLPKLKVLQIYNNSLTGEIPSVLANSTTLTMLSLYDNFLIGQIPQKLGKFSPMIVLDLSENRLSGPLPLDICRGGKLLYFLVLENMLSGEIPASFAECRSLLRFRISFNQLVGTIPEGVLGLPHVSIIDVAHNNLTGSISNSISQAKNLSELFLQRNRISGVVPPEISGATNLVKLDLSNNLLSGPVPSEIGNLKKLNLVMLQENQLDSSIPSSFTSLKSLNVLDLSNNLLSGKIPESLSELFPTSLNFSNNQLSGPIPLSLIKQGLADSFSGNPNLCVPPAYFISPDQKFPVCSHSSFTKRLNFIWAIGIPLLIFFTGAVLFLKRRITTRKTAEIENKETLSSSFFHLQSFDQNLILEAMVEKNIVGHGGSGTVYKIELGNGETVAVKRLWNRRAKHLFDKELKTEVETLGTIRHKNIVKLYSYFSGLNCSLLVYEYMSNGNLWDALHKGLIHLDWPTRHRIAVGIAQGLAYLHHDLSPPIIHRDIKSTNILLDASYQPKVADFGIAKVLQGSKDSTNSVIAGTYGYLAPGKFLNRFHFQFQKEKTNSPNSFVILQNMHIHRKQQPNAMCTVLG 863
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4328805 4332467 - Hsped.10g03940.1 Hepe10g0394 580941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0394 863 PRINTS Leucine-rich repeat signature 461 474 - -
Hepe10g0394 863 PRINTS Leucine-rich repeat signature 506 519 - -
Hepe10g0394 863 PANTHER LEUCINE RICH REPEAT KINASE 2 367 819 IPR051420 -
Hepe10g0394 863 Pfam Protein kinase domain 651 819 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0394 863 ProSiteProfiles Protein kinase domain profile. 649 863 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0394 863 SUPERFAMILY RNI-like 76 354 - -
Hepe10g0394 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0394 863 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524(InterPro)
Hepe10g0394 863 SMART LRR_typ_2 168 194 IPR003591 -
Hepe10g0394 863 SMART LRR_typ_2 482 505 IPR003591 -
Hepe10g0394 863 SMART LRR_typ_2 290 314 IPR003591 -
Hepe10g0394 863 SMART LRR_typ_2 506 530 IPR003591 -
Hepe10g0394 863 SMART LRR_typ_2 242 266 IPR003591 -
Hepe10g0394 863 SUPERFAMILY L domain-like 254 578 - -
Hepe10g0394 863 FunFam Os07g0541700 protein 731 813 - -
Hepe10g0394 863 FunFam Leucine-rich repeat receptor-like protein kinase 184 286 - -
Hepe10g0394 863 FunFam Receptor protein-tyrosine kinase CEPR1 290 576 - -
Hepe10g0394 863 Pfam Leucine rich repeat 411 471 IPR001611 GO:0005515(InterPro)
Hepe10g0394 863 SUPERFAMILY Protein kinase-like (PK-like) 629 825 IPR011009 -
Hepe10g0394 863 SMART serkin_6 649 862 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0394 863 Gene3D Transferase(Phosphotransferase) domain 1 638 831 - -
Hepe10g0394 863 Pfam Leucine Rich Repeat 508 530 IPR001611 GO:0005515(InterPro)
Hepe10g0394 863 Pfam Leucine Rich Repeat 146 165 IPR001611 GO:0005515(InterPro)
Hepe10g0394 863 Pfam Leucine Rich Repeat 244 266 IPR001611 GO:0005515(InterPro)
Hepe10g0394 863 Pfam Leucine Rich Repeat 292 313 IPR001611 GO:0005515(InterPro)
Hepe10g0394 863 Pfam Leucine Rich Repeat 533 550 IPR001611 GO:0005515(InterPro)
Hepe10g0394 863 Gene3D Ribonuclease Inhibitor 294 576 IPR032675 -
Hepe10g0394 863 FunFam receptor protein-tyrosine kinase CEPR1 632 726 - -
Hepe10g0394 863 Gene3D Ribonuclease Inhibitor 35 182 IPR032675 -
Hepe10g0394 863 Gene3D Ribonuclease Inhibitor 183 286 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2198 Hepe-Chr1:86694398 Hepe10g0394 Hepe-Chr10:4328805 1.67e-143 dispersed
Hepe10g0394 Hepe-Chr10:4328805 Hepe04g1879 Hepe-Chr4:73725561 3.39e-53 dispersed
Hepe01g2197 Hepe-Chr1:86678875 Hepe10g0394 Hepe-Chr10:4328805 6.35e-53 wgd
Hepe10g0394 Hepe-Chr10:4328805 Hepe02g0674 Hepe-Chr2:7414087 2.51e-52 wgd
Hepe10g0394 Hepe-Chr10:4328805 Hepe04g1361 Hepe-Chr4:69236277 2.39e-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73167 PF00069 Pkinase 2.10E-36 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0394 - - - 0.0