Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0405 ATGGATAACTATTCCTACTCCTCCTATGCCGATTCTCGCGACTCCTCTCCTCGTTCCTGCGAAAATCCCTCTTGGGACGACCCTCCTCCTCCTCCTTCCAACAACAACTACAAAGTCAAATTCATGTGCAGCTATGGCGGCAAGATTCACCCCAGATCCCACGACAATCAACTCACCTACACCGGCGGCGACACCAAGATTCTCGCCGTTGATCGCAACGTCAATTTCTCCACCATTTCCTCCAGGTTATCCTCTCTCTCCGATGTTTCCCTTTGTTTTAAGTACCAACTCCCTGGCGAAGATCTCGATGCTTTGATTTCTGTTACCAACGATGAGGATCTCGAGCACATGATGTTGGAGTACGACCGTCTGCATCGCGTCTCCAAGCCTGCGCGGTTGAGGCTTTTTCTCTTTCCTTTGAATTCAACTGCTCCGACGGCGATTCTTGCTTCCCGCGACGCGAAATCGGACCGCCAGTGGTTTGTTGATGCTTTGAATTCTGTCCGGATTCAGCCTCTGGATGATTCTTCGTCGCCGCCTACGGATGCTCCTGGATCAGCTTCGAATCCTGATTTCTTGTTTGGATTTGATAAAGGCTTCCCTCCGCTTCCTGGCTCTAACTTGACGGATTCCGCCGCCGTCGTTACGGTAACGAATGCGGCGGTGAAGGACGTTTCGGCGGGGTCTGATTGTGGATCTGAAGATCGACATGTCGTTGGAGAATTACCTCCTGTTGTTTCTCCGTCGGAAATTCAGAGGCAGATTCAGGATTTGCAGAGATTGCAATTGATGACTGCAGAGAGAAGCAGCGATGAGACGAACTCCAAGACTTCCGCCGGAGATTCTCACCCTCCCATAGTTACAGATCAGAAAATCGCTCCACCACCGGCGGCAAATCCTCTGCCTGTACCAATGGCGTACTTCCCCGAGAGGCAAATGATCTCTGGTGGTTATCCAATGGCGGCTACAGCTAATAATGCTCCGGCGAACGACCAGTCAATATATCTAATTCCAACTGCAGGGGGTTTATTTCAAGCTCAGACGCTTAGAACCATCAATGGCGGACCAATTGGGCACCAGCCTTATTACGGAATTCATCCCTACCATGAAGGTTCTCTTCAGCAGCAAAATGTTGGGATTCAAATGATGCAGCCACAAGCTCAGGTTGCGTATGACAGCACCGGCAGACATGTTTACTTTACCACGGCGCAGCCATATCAGACCATGGCTCCGGTGGCGGTTGATGGAAGAACTAGTGGCGGTGTTGCAGGCGGCTCCTATAATCCGGAGGCGAAGAATCTTCTCGGCGACGGCTTTGATTATCCAAGAGCTTCTGCAAATGCTGAGATCGAGTTCTGGAGATTAGGATTTCTTCTGCCGGAGCGGAGGAGATTGACGGCGGAGATGGTGGTTAGAAAAGTCGGCAAATATGAGGTCGGGAGGACGATTGGAGAAGGTACTTTTGCGAAGGTAAAGTTCGCTCAGAACACTGAGACTGGCGAGAGTGTTGCTATGAAAATCCTCGATCGGAGTACCATAATCAAGCACAAGATGGTTGAGCAGATAAAGAAGGAGATTTCTATCATGAAGCTTGTGAGGCACCCTTATGTTGTTCGTCTTCACGAGGTTCTTGCAAGCCGTACTAAGATTTATATAATCTTGGAGTACATTACTGGTGGCGAATTGTTTGACAAAATAGTTCATCATGGACGGCTTAGTGAAGCTGAATCTAGGAAGTACTTCCAACAGCTAATTGATGGTGTCGATTATTGCCATAGCAAGGGAGTATTCCACAGAGATTTAAAGCCTGAAAATCTGCTACTCGACTCCCTAGGTAATTTAAAGATCTCAGACTTTGGTCTGAGTGCATTGCCTGAAGAAGGAGTTAGCCTACTCCGCACAACATGTGGGACTCCAAACTATGTAGCACCAGAGGTGCTCAATCACAAGGGTTATGATGGTGCTATGGCAGATGTTTGGTCATGTGGGGTAATCCTTTATGTGTTGATGGCAGGATATCTTCCATTTGATGAGCTTGATCTCACCACGTTATATAGTAAGATAGAGAGAGCTGACTTTTCATGTCCATCTTGGTTCCCTGTGAGGGCAAAAGCCTTGATCCATAGAATATTTGACCCCAATCCTTCAACTCGTATTACCATTGAACAGATCAGAGACGATGAGTGGTACAAGAAAAATTATGTTTCTGTCAAACTTTTCGAAGATGAAGATGTAAATCTGGATGATATAAATGCTGTCTTTGATGATCCTGAGGAACAAAGGCCCGGAGAAGAATGTGGTAACGAAGACATGAGCCCTCTGGCCCTTAATGCATTCGATTTATTAATTCTATCTCAAGGCTTAAACCTGGGAACGATGTTCGACCGAGGCCAGGATTCTATGAAGCACCCGACACGCTTCGTCTGCCAAAAACCTGCAAAGGTTTTATTATCAACTATGGAAGTTGTAGCTCAATCAATGAGTTTCAAGACGCACATTCGCAATTACAAGATGAGAGTAGAAGGCCCATCAGCAAGCAAGACTTCTTACTTCTCGGTCATTATGGAAATTTTCGAAGTTGCTCCCACGTTCTTTATGGTGGACATTCAGAAAGCAGCAGGGGAAACCAGCGAGTACCTCAAGTTCTACAAGAGCTTCTACAGCAATCTTGAGGATATCATCTGGAAACCTTCGATTGACGCCAGCAAATCCAGGATCGCCAAGAACAAGAGTAAAAAACGTTGA 2745 47.07 MDNYSYSSYADSRDSSPRSCENPSWDDPPPPPSNNNYKVKFMCSYGGKIHPRSHDNQLTYTGGDTKILAVDRNVNFSTISSRLSSLSDVSLCFKYQLPGEDLDALISVTNDEDLEHMMLEYDRLHRVSKPARLRLFLFPLNSTAPTAILASRDAKSDRQWFVDALNSVRIQPLDDSSSPPTDAPGSASNPDFLFGFDKGFPPLPGSNLTDSAAVVTVTNAAVKDVSAGSDCGSEDRHVVGELPPVVSPSEIQRQIQDLQRLQLMTAERSSDETNSKTSAGDSHPPIVTDQKIAPPPAANPLPVPMAYFPERQMISGGYPMAATANNAPANDQSIYLIPTAGGLFQAQTLRTINGGPIGHQPYYGIHPYHEGSLQQQNVGIQMMQPQAQVAYDSTGRHVYFTTAQPYQTMAPVAVDGRTSGGVAGGSYNPEAKNLLGDGFDYPRASANAEIEFWRLGFLLPERRRLTAEMVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKILDRSTIIKHKMVEQIKKEISIMKLVRHPYVVRLHEVLASRTKIYIILEYITGGELFDKIVHHGRLSEAESRKYFQQLIDGVDYCHSKGVFHRDLKPENLLLDSLGNLKISDFGLSALPEEGVSLLRTTCGTPNYVAPEVLNHKGYDGAMADVWSCGVILYVLMAGYLPFDELDLTTLYSKIERADFSCPSWFPVRAKALIHRIFDPNPSTRITIEQIRDDEWYKKNYVSVKLFEDEDVNLDDINAVFDDPEEQRPGEECGNEDMSPLALNAFDLLILSQGLNLGTMFDRGQDSMKHPTRFVCQKPAKVLLSTMEVVAQSMSFKTHIRNYKMRVEGPSASKTSYFSVIMEIFEVAPTFFMVDIQKAAGETSEYLKFYKSFYSNLEDIIWKPSIDASKSRIAKNKSKKR 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4532641 4545565 + Hsped.10g04050.1 Hepe10g0405 580952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0405 914 SUPERFAMILY Protein kinase-like (PK-like) 474 731 IPR011009 -
Hepe10g0405 914 ProSitePatterns Protein kinases ATP-binding region signature. 483 515 IPR017441 GO:0005524(InterPro)
Hepe10g0405 914 ProSiteProfiles Protein kinase domain profile. 477 730 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0405 914 SMART PB1_new 53 140 IPR000270 GO:0005515(InterPro)
Hepe10g0405 914 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 58 140 - -
Hepe10g0405 914 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 472 880 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Hepe10g0405 914 Gene3D - 58 139 - -
Hepe10g0405 914 FunFam Non-specific serine/threonine protein kinase 468 556 - -
Hepe10g0405 914 FunFam Non-specific serine/threonine protein kinase 771 895 - -
Hepe10g0405 914 Gene3D Kinase associated domain 1, KA1 770 896 - -
Hepe10g0405 914 Gene3D Transferase(Phosphotransferase) domain 1 469 765 - -
Hepe10g0405 914 CDD PB1_UP2 42 138 - -
Hepe10g0405 914 Pfam PB1 domain 55 139 IPR000270 GO:0005515(InterPro)
Hepe10g0405 914 MobiDBLite consensus disorder prediction 267 288 - -
Hepe10g0405 914 Pfam NAF domain 773 831 IPR004041 GO:0007165(InterPro)
Hepe10g0405 914 ProSiteProfiles NAF domain profile. 771 795 IPR018451 GO:0007165(InterPro)
Hepe10g0405 914 CDD CIPK_C 777 892 - -
Hepe10g0405 914 MobiDBLite consensus disorder prediction 1 33 - -
Hepe10g0405 914 FunFam Non-specific serine/threonine protein kinase 470 771 - -
Hepe10g0405 914 MobiDBLite consensus disorder prediction 267 284 - -
Hepe10g0405 914 Pfam Protein kinase domain 477 729 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0405 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0405 914 SUPERFAMILY CAD & PB1 domains 54 143 - -
Hepe10g0405 914 MobiDBLite consensus disorder prediction 1 22 - -
Hepe10g0405 914 SMART serkin_6 477 730 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1163 Hepe-Chr1:76752898 Hepe10g0405 Hepe-Chr10:4532641 4.47e-33 dispersed
Hepe10g0045 Hepe-Chr10:386474 Hepe10g0405 Hepe-Chr10:4532641 3.10e-26 dispersed
Hepe10g0405 Hepe-Chr10:4532641 HepeContig65g0010 Hepe-ChrContig65:1224606 2.70e-60 dispersed
Hepe07g0534 Hepe-Chr7:5666685 Hepe10g0405 Hepe-Chr10:4532641 5.71e-29 transposed
Hepe09g0673 Hepe-Chr9:6368696 Hepe10g0405 Hepe-Chr10:4532641 6.27e-205 transposed
Hepe10g0405 Hepe-Chr10:4532641 Hepe02g0691 Hepe-Chr2:7605547 1.47e-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73168 PF00069 Pkinase 2.70E-70 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0405 - - - 0.0