Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0430 ATGGTCCATGCTGGTTCTACCCAATTTTCTCATAAACTGGGGATTCAAAGTGTTCGTGGATGCAATAAGTTAAATATTAGTGGCAAGGGAAAGACCCGTCTACATCTTGTTACTATAATTCCTACATCACACGGTCTGAGGCATGATTTGGGAAGTCTTCAGCTCTTACGTAGTGTAAATCACCCGATGTATCCTGTGTCTTCCAGAGCAAATGTATTTGTGTGTCGATCTATTCTGGAACCAGGAGGCGGCGTTGGGACCGCTGTTCTAAAATCTGCAGCTGTGGTTTTGACAAGATCTTATGATGCTTTGCATGGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGTGTCATTGCTTTTGCTGCTTGGGGTGTTGCACCTCTTATGCGTTTGGGGAGGATTCTATTTCTTCATGAGCCAGATAACAGTTGGAAGAAAAGTAGTACATACCATGTTTTGACTTCGTATGTTCAGCCCTTACTGCTATGGACTGGAGCTACCCTGATCTGCAGGGCATTGGATCCAGTAGTTTTACCTTCAGTAGCCAGTCAGGTTGTCAAACAACGACTTCTGAATTTTGTTCGATCTTTGTCTACTGTTGTGGCATTTGCCTATTGTATATCAAGTTTGATTCAACAAGTCCAAAAATTTGCTACTGAATCAAATGACTCAAGTGATGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTTTACACTGCAGTCTGGATTGCTGCTCTTTCATTGTTCATGGAGTTGCTCGGTTTTTCTACCCAGAAGTGGCTCACAGCTGGGGGTCTTGGAACTGTATTGCTTACCCTTGCTGGTCGTGAGATATTTACCAACTTTCTTTCAAGTGTAATGATTCATGCAACACGACCATTTGTGATAAATGAATGGATTCAGACAAAGATTGATGGATATGAAGTCTCTGGAACGGTTGAGCACGTTGGTTGGTGGTCGCCAACTATTATCCGAGGTGATGATCGTGAAGCAGTCCATATTCCAAATCACAAGTTCACTGTTAGTGTTGTGAGGAATCTTACCCAGAAGACTCATTGGCGTATCAAGACTCATCTTGCCATCAGCCACTTAGATGTTAATAAGATTAATTATATTGTAGCTGATATGCGCAAAGTTTTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGTAGAATTTTTTTGGATAACGTCAATTCTGAAAACCAGGCTCTTATGATTATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTGTGTGTCAAGGAGGCAATTCTCTTGGATCTCCTCAGGGTTATCAGCCATCATAGGGCCCGGCTTGCTACTCCTATTCGCACTGTTCAGAAAATATACGGTGAGCCTGACTTGGAGAATGTGCCATTTTCCGAGACCATGTATTCTCGTACAGGGGGGGCTACTAACCGTCCTCTGCTTCTTATCGAGCCAACTTATAAAGTCAATGGTGATGATAAAGCCAAAGTCTCTAGTCGTCCCACTCGCTCATCAAATGAAGAGAAGGATGCCAAACAAGAAGCAGTCTCAACATCAAATCTTGATATGAAAACAGATGACAAAAAATCAACTTCTCCATCTGGTACAGCACCTAAGCCTTCAACAGGGCCCGTATCCACAGCCAACACACAGACCCAGAATCTATCAACCAGTAGTACTCCAGAACAAAGCAATGAGATAAAAGGAGAAAAGAAAGATCTCATGGGACTGAATTCCAAGGATAATACGCCGAGAGGGACTTCGCCCAAAAGGTCGCACTCAGCCTCCAGTCCCGGCAGCGAGAAAGCTGATATTCCTTCTTCGAGCTTGCAGAATAAGCAAGATGGTGAGAAGCCAGCGGCCAGGCCGCCGATGGAGGAGAATATTGTCCTGGGAGTTGCCTTGGAAGGCTCGAAAAGAACTCTTCCAATTGATGAAGATATGGATCCGTCTCCCTTTCACTCTCCTGCAGATTCAAAAGAAAGTTCCACACATAGGAATGGGAGTGAGTTTCTTTCCAATAGCAAGGATATGAAAGATGGGCAGATGCCTGCAGTTCCAGGAGGTGCGACAAAAAATGATTGA 2103 43.51 MVHAGSTQFSHKLGIQSVRGCNKLNISGKGKTRLHLVTIIPTSHGLRHDLGSLQLLRSVNHPMYPVSSRANVFVCRSILEPGGGVGTAVLKSAAVVLTRSYDALHGSPLLLKLIPAACVIAFAAWGVAPLMRLGRILFLHEPDNSWKKSSTYHVLTSYVQPLLLWTGATLICRALDPVVLPSVASQVVKQRLLNFVRSLSTVVAFAYCISSLIQQVQKFATESNDSSDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVINEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSVVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNVNSENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYGEPDLENVPFSETMYSRTGGATNRPLLLIEPTYKVNGDDKAKVSSRPTRSSNEEKDAKQEAVSTSNLDMKTDDKKSTSPSGTAPKPSTGPVSTANTQTQNLSTSSTPEQSNEIKGEKKDLMGLNSKDNTPRGTSPKRSHSASSPGSEKADIPSSSLQNKQDGEKPAARPPMEENIVLGVALEGSKRTLPIDEDMDPSPFHSPADSKESSTHRNGSEFLSNSKDMKDGQMPAVPGGATKND 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4813657 4821060 - Hsped.10g04300.1 Hepe10g0430 580977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0430 700 MobiDBLite consensus disorder prediction 497 535 - -
Hepe10g0430 700 MobiDBLite consensus disorder prediction 497 700 - -
Hepe10g0430 700 MobiDBLite consensus disorder prediction 586 621 - -
Hepe10g0430 700 MobiDBLite consensus disorder prediction 646 671 - -
Hepe10g0430 700 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Hepe10g0430 700 Pfam Mechanosensitive ion channel, beta-domain 282 352 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe10g0430 700 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 686 IPR045042 -
Hepe10g0430 700 Gene3D - 192 296 - -
Hepe10g0430 700 Gene3D - 298 353 IPR023408 -
Hepe10g0430 700 MobiDBLite consensus disorder prediction 536 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0565 Hepe-Chr7:6069262 Hepe10g0430 Hepe-Chr10:4813657 2.81e-232 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0430 K22047 - csv:101213477 1168.68