Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0446 ATGGCGCCGAGTTTTGATCTTGCTGTTTCCAACCTTTTATGTGCTGAAGAGAATTGTATTTTCGATAATAACGATGATGACGATCAAACTGTAGTTGACGATTTTGTTGCGCCGACTTATTTTCTTAGAAGTAGTGGGATTCAGAGTCGTCGGAATCCGACCCATCACGGCGGAGATGGCGACGGCGGTGATGGGTTTCCGTTTATGAGCGATGAATGTTTGATTGACATGGTTGAGAAGGAAACCCATCACTTGCCTGTTGAGGGTTATCTCGTTAAGTTGCAGAACGGCGAGTTGGATGTTGAAGCAAGAAAAGAAGCCGTCGATTGGATTCAAAAGGTGAGTGCTCATTTCAGTTTTGGACCTCTCTGTACATACTTAGCCGTAAACTACTTGGATCGTTTCCTCTCTGCTTACGATCTACCCAAAGGCAAAGCTTGGACAATGCAGTTGCTGGCTGTGGCATGTATGTCTCTTGCAGCCAAATTGGAGGAGACCGAAGTCCCACTCTCTTTGGATTTACAGGTGGGTGGATCAAAATTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACCACATTGGGGTGGAGAATGCAAGCAGTTACCCCTTTCTCGTTTATTGATCATTACCTCCGCAAGATTCACGACAACGACGAGCTCTCTATCAAAATGTCGATCGCCCGATCGATTCATCTCCTCTTGAACATAATACAAGGGATTGACATCTTGGAATTCAAACCTTCTGAAATTGCAGCAGCTGTGGCAATATCAGTAGCAGGAGAAGCACAAGCAGTGGACCCTGAGAGAGCAATTCCTCTTCTCACTCAGCAACTCCAAATGGAAAGAGTTATGAAGTGCATTAAATTAATCAATGACATGTTGTTAATGTGCGGGGGAGGGTCGGTGAAGGACTCGAGAGCGTCGATGTCGGAGCCCTGGAGCCCGAGCGGGGTGTTGGACGTGACGTGCTTAAGCTATAAAAGCAATGATACAGCAGTTGGGTCATGTGCAAACTCTTCACATCATAACAGCTCAAATGCTACAAAGAGGAGAAGACTGAACAGACCATGTGAAGTGGAGCTATAG 1101 45.5 MAPSFDLAVSNLLCAEENCIFDNNDDDDQTVVDDFVAPTYFLRSSGIQSRRNPTHHGGDGDGGDGFPFMSDECLIDMVEKETHHLPVEGYLVKLQNGELDVEARKEAVDWIQKVSAHFSFGPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDNDELSIKMSIARSIHLLLNIIQGIDILEFKPSEIAAAVAISVAGEAQAVDPERAIPLLTQQLQMERVMKCIKLINDMLLMCGGGSVKDSRASMSEPWSPSGVLDVTCLSYKSNDTAVGSCANSSHHNSSNATKRRRLNRPCEVEL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5063334 5065735 + Hsped.10g04460.1 Hepe10g0446 580993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0446 366 Gene3D - 76 291 - -
Hepe10g0446 366 Pfam Cyclin, N-terminal domain 77 203 IPR006671 -
Hepe10g0446 366 SMART Cyclin_C_2 206 332 IPR004367 -
Hepe10g0446 366 FunFam D2/4-type cyclin 87 202 - -
Hepe10g0446 366 CDD CYCLIN_AtCycD-like_rpt1 103 201 - -
Hepe10g0446 366 PANTHER CYCLINS 78 297 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Hepe10g0446 366 MobiDBLite consensus disorder prediction 340 366 - -
Hepe10g0446 366 SUPERFAMILY Cyclin-like 189 300 IPR036915 -
Hepe10g0446 366 Gene3D - 87 204 - -
Hepe10g0446 366 SUPERFAMILY Cyclin-like 67 203 IPR036915 -
Hepe10g0446 366 SMART cyclin_7 109 197 IPR013763 -
Hepe10g0446 366 Pfam Cyclin, C-terminal domain 206 301 IPR004367 -
Hepe10g0446 366 CDD CYCLIN_AtCycD-like_rpt2 206 295 - -
Hepe10g0446 366 FunFam D6-type cyclin 203 293 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1270 Hepe-Chr4:68234676 Hepe10g0446 Hepe-Chr10:5063334 5.97e-43 dispersed
Hepe07g0449 Hepe-Chr7:4631947 Hepe10g0446 Hepe-Chr10:5063334 1.29e-43 dispersed
Hepe08g0502 Hepe-Chr8:4412557 Hepe10g0446 Hepe-Chr10:5063334 4.45e-34 dispersed
Hepe08g1303 Hepe-Chr8:14698500 Hepe10g0446 Hepe-Chr10:5063334 1.69e-44 dispersed
Hepe04g0837 Hepe-Chr4:62625013 Hepe10g0446 Hepe-Chr10:5063334 1.54e-21 transposed
Hepe08g1610 Hepe-Chr8:23522607 Hepe10g0446 Hepe-Chr10:5063334 1.16e-52 transposed
Hepe10g1669 Hepe-Chr10:53378694 Hepe10g0446 Hepe-Chr10:5063334 1.04e-53 transposed
Hepe10g0446 Hepe-Chr10:5063334 Hepe04g1407 Hepe-Chr4:69713449 6.15e-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0446 K18810 - csv:101216206 590.497