Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g0446 | ATGGCGCCGAGTTTTGATCTTGCTGTTTCCAACCTTTTATGTGCTGAAGAGAATTGTATTTTCGATAATAACGATGATGACGATCAAACTGTAGTTGACGATTTTGTTGCGCCGACTTATTTTCTTAGAAGTAGTGGGATTCAGAGTCGTCGGAATCCGACCCATCACGGCGGAGATGGCGACGGCGGTGATGGGTTTCCGTTTATGAGCGATGAATGTTTGATTGACATGGTTGAGAAGGAAACCCATCACTTGCCTGTTGAGGGTTATCTCGTTAAGTTGCAGAACGGCGAGTTGGATGTTGAAGCAAGAAAAGAAGCCGTCGATTGGATTCAAAAGGTGAGTGCTCATTTCAGTTTTGGACCTCTCTGTACATACTTAGCCGTAAACTACTTGGATCGTTTCCTCTCTGCTTACGATCTACCCAAAGGCAAAGCTTGGACAATGCAGTTGCTGGCTGTGGCATGTATGTCTCTTGCAGCCAAATTGGAGGAGACCGAAGTCCCACTCTCTTTGGATTTACAGGTGGGTGGATCAAAATTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACCACATTGGGGTGGAGAATGCAAGCAGTTACCCCTTTCTCGTTTATTGATCATTACCTCCGCAAGATTCACGACAACGACGAGCTCTCTATCAAAATGTCGATCGCCCGATCGATTCATCTCCTCTTGAACATAATACAAGGGATTGACATCTTGGAATTCAAACCTTCTGAAATTGCAGCAGCTGTGGCAATATCAGTAGCAGGAGAAGCACAAGCAGTGGACCCTGAGAGAGCAATTCCTCTTCTCACTCAGCAACTCCAAATGGAAAGAGTTATGAAGTGCATTAAATTAATCAATGACATGTTGTTAATGTGCGGGGGAGGGTCGGTGAAGGACTCGAGAGCGTCGATGTCGGAGCCCTGGAGCCCGAGCGGGGTGTTGGACGTGACGTGCTTAAGCTATAAAAGCAATGATACAGCAGTTGGGTCATGTGCAAACTCTTCACATCATAACAGCTCAAATGCTACAAAGAGGAGAAGACTGAACAGACCATGTGAAGTGGAGCTATAG | 1101 | 45.5 | MAPSFDLAVSNLLCAEENCIFDNNDDDDQTVVDDFVAPTYFLRSSGIQSRRNPTHHGGDGDGGDGFPFMSDECLIDMVEKETHHLPVEGYLVKLQNGELDVEARKEAVDWIQKVSAHFSFGPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIHDNDELSIKMSIARSIHLLLNIIQGIDILEFKPSEIAAAVAISVAGEAQAVDPERAIPLLTQQLQMERVMKCIKLINDMLLMCGGGSVKDSRASMSEPWSPSGVLDVTCLSYKSNDTAVGSCANSSHHNSSNATKRRRLNRPCEVEL | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5063334 | 5065735 | + | Hsped.10g04460.1 | Hepe10g0446 | 580993 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g0446 | 366 | Gene3D | - | 76 | 291 | - | - | |
Hepe10g0446 | 366 | Pfam | Cyclin, N-terminal domain | 77 | 203 | IPR006671 | - | |
Hepe10g0446 | 366 | SMART | Cyclin_C_2 | 206 | 332 | IPR004367 | - | |
Hepe10g0446 | 366 | FunFam | D2/4-type cyclin | 87 | 202 | - | - | |
Hepe10g0446 | 366 | CDD | CYCLIN_AtCycD-like_rpt1 | 103 | 201 | - | - | |
Hepe10g0446 | 366 | PANTHER | CYCLINS | 78 | 297 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Hepe10g0446 | 366 | MobiDBLite | consensus disorder prediction | 340 | 366 | - | - | |
Hepe10g0446 | 366 | SUPERFAMILY | Cyclin-like | 189 | 300 | IPR036915 | - | |
Hepe10g0446 | 366 | Gene3D | - | 87 | 204 | - | - | |
Hepe10g0446 | 366 | SUPERFAMILY | Cyclin-like | 67 | 203 | IPR036915 | - | |
Hepe10g0446 | 366 | SMART | cyclin_7 | 109 | 197 | IPR013763 | - | |
Hepe10g0446 | 366 | Pfam | Cyclin, C-terminal domain | 206 | 301 | IPR004367 | - | |
Hepe10g0446 | 366 | CDD | CYCLIN_AtCycD-like_rpt2 | 206 | 295 | - | - | |
Hepe10g0446 | 366 | FunFam | D6-type cyclin | 203 | 293 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1270 | Hepe-Chr4:68234676 | Hepe10g0446 | Hepe-Chr10:5063334 | 5.97e-43 | dispersed | |
Hepe07g0449 | Hepe-Chr7:4631947 | Hepe10g0446 | Hepe-Chr10:5063334 | 1.29e-43 | dispersed | |
Hepe08g0502 | Hepe-Chr8:4412557 | Hepe10g0446 | Hepe-Chr10:5063334 | 4.45e-34 | dispersed | |
Hepe08g1303 | Hepe-Chr8:14698500 | Hepe10g0446 | Hepe-Chr10:5063334 | 1.69e-44 | dispersed | |
Hepe04g0837 | Hepe-Chr4:62625013 | Hepe10g0446 | Hepe-Chr10:5063334 | 1.54e-21 | transposed | |
Hepe08g1610 | Hepe-Chr8:23522607 | Hepe10g0446 | Hepe-Chr10:5063334 | 1.16e-52 | transposed | |
Hepe10g1669 | Hepe-Chr10:53378694 | Hepe10g0446 | Hepe-Chr10:5063334 | 1.04e-53 | transposed | |
Hepe10g0446 | Hepe-Chr10:5063334 | Hepe04g1407 | Hepe-Chr4:69713449 | 6.15e-94 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g0446 | K18810 | - | csv:101216206 | 590.497 |