Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0469 ATGATGGCATTGGAAACTGTGGTTTACCCACAAGATACATTTAGTTATGTTTGCAGAGATTTTTGTTCTTATGGAGGAGGAGGAGCTTGGGGTGGCTATGACTATGGCTTTCAATTTGAAGAAGAAAAGGGTTTTCTTGGAGTGATTGAGAGTCAAGAGGACCAGAAATTGGCTGCTAATTGGGAGGCTTCACCGGAGGAATGTTCGATCGATCAGTCTCTTCCTGGAGGAGCTCTGTATACTGCGGTGGAAGTTGAACCACCACCACCACCGCCACCGCCGACCACCGGGAGGAGAAAGCGGCGGCGGACTAGGAGCACCAAAAACAAAGAGGAGATTGAAAACCAGAGGATGACCCACATCGCGGTGGAGCGCAACCGCCGGAAGCAAATGAATGAGTATCTGTCTGTCCTCCGATCACTTATGCCGTCTTCTTATGTTCAAAGGGGTGACCAAGCCTCGATTATTGGTGGTGCCATAAACTTTGTCAAGGAATTAGAGCAACAATTGCAATTCACTAAGGCCCATAATCCAATTGAAAATGAAAATGCTATATCCCCTTTTGCAGAGTTCTTTTCCTTCCCCCAGTTCTCAACATCTGCCACTCATTGCAACAACTCGGCCAATGACTCCGCCGTGCCTCAGCCGCACACCCAATGGGCCGCCGCCGGAGACATCGAAGTCACCATGGTCGACAGCCATGCCAACCTTAAAATCCTCTCTCAAAAACGCCCTCGCCAGCTCCTTAAAATGGTCGCTGGATTTCAAAGCTTGAGACTCACTGTTCTTCATCTCAATGTCACAACTTTAAACCAAATGGTTCTTTACTCAGTAAGCATCAAGGTTGAGGAAGGATGTCAGCTGAATACAGTGGATGAAATTGCTGCAGCTGTGAATCAAATCCTACTTTCCATTGAAGAGGAAGCTGCTGCTTTCAGCTGA 942 47.66 MMALETVVYPQDTFSYVCRDFCSYGGGGAWGGYDYGFQFEEEKGFLGVIESQEDQKLAANWEASPEECSIDQSLPGGALYTAVEVEPPPPPPPPTTGRRKRRRTRSTKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPSSYVQRGDQASIIGGAINFVKELEQQLQFTKAHNPIENENAISPFAEFFSFPQFSTSATHCNNSANDSAVPQPHTQWAAAGDIEVTMVDSHANLKILSQKRPRQLLKMVAGFQSLRLTVLHLNVTTLNQMVLYSVSIKVEEGCQLNTVDEIAAAVNQILLSIEEEAAAFS 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5422246 5424485 + Hsped.10g04690.1 Hepe10g0469 581016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0469 313 PANTHER MAX DIMERIZATION, MAD 52 302 - GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe10g0469 313 MobiDBLite consensus disorder prediction 83 113 - -
Hepe10g0469 313 SMART finulus 121 172 IPR011598 GO:0046983(InterPro)
Hepe10g0469 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 115 181 IPR036638 GO:0046983(InterPro)
Hepe10g0469 313 Pfam Helix-loop-helix DNA-binding domain 116 167 IPR011598 GO:0046983(InterPro)
Hepe10g0469 313 Gene3D - 99 178 IPR036638 GO:0046983(InterPro)
Hepe10g0469 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 115 166 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1782 Hepe-Chr6:68896549 Hepe10g0469 Hepe-Chr10:5422246 1.37e-63 dispersed
Hepe07g0089 Hepe-Chr7:833341 Hepe10g0469 Hepe-Chr10:5422246 8.64e-22 dispersed
Hepe08g2352 Hepe-Chr8:63733114 Hepe10g0469 Hepe-Chr10:5422246 5.05e-80 dispersed
Hepe09g1844 Hepe-Chr9:58491357 Hepe10g0469 Hepe-Chr10:5422246 5.10e-27 dispersed
Hepe10g0469 Hepe-Chr10:5422246 Hepe02g0417 Hepe-Chr2:3976085 1.30e-07 dispersed
Hepe10g0469 Hepe-Chr10:5422246 Hepe05g1757 Hepe-Chr5:67888506 3.48e-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56458 PF00010 HLH 4.50E-10 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0469 - - - 0.0