Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0481 ATGGCCGCCCCCGCCGCCGCCCCCTCTCTTCGTGAGGAGCATGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCCACTGACAAGGACGAGCTCACCGTCGAGGAGAGAAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGCGCTCGCAGGGCCTCCTGGCGTATCATTTCCTCCATCGAGCAGAAGGAGGAGTCCCGAGGCAACGACGACCATGTCTCTGTGATCCGTGACTATAGATCCAAAATTGAGACCGAGCTCTCCAATATTTGCGATGGAATCCTGAAACTCCTCGATTCCAGACTCATTCCCTCCGCTGCCTCCGGAGATTCCAAGGTCTTTTACCTCAAAATGAAGGGAGATTACCATAGATATCTCGCTGAATTCAAAACCGGAGCCGAAAGGAAGGAAGCCGCCGAAAGTACCCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATTCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCCCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCCCCTGATCGTGCCTGCAGTCTTGCAAAACAGGCGTTTGATGAAGCTATCGCCGAGTTGGATACCCTTGGCGAGGAATCCTACAAAGACAGCACTTTGATTATGCAACTTCTTCGCGATAACCTCACTCTCTGGACCTCCGACATGCAGGACGATGGTGCTGATGAGATTAAAGAAGCTCCTCCCAAGCGTGAGGAAGAAAAGCAGTGA 795 51.95 MAAPAAAPSLREEHVYMAKLAEQAERYEEMVEFMEKVSASTDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREEEKQ 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5581578 5583418 - Hsped.10g04810.1 Hepe10g0481 581028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0481 264 Gene3D - 2 254 IPR036815 -
Hepe10g0481 264 SMART 1433_4 11 254 IPR023410 -
Hepe10g0481 264 PRINTS 14-3-3 protein zeta signature 160 186 IPR000308 -
Hepe10g0481 264 PRINTS 14-3-3 protein zeta signature 125 147 IPR000308 -
Hepe10g0481 264 PRINTS 14-3-3 protein zeta signature 94 118 IPR000308 -
Hepe10g0481 264 PRINTS 14-3-3 protein zeta signature 45 74 IPR000308 -
Hepe10g0481 264 PRINTS 14-3-3 protein zeta signature 214 243 IPR000308 -
Hepe10g0481 264 PRINTS 14-3-3 protein zeta signature 187 213 IPR000308 -
Hepe10g0481 264 PIRSF 2014/3/3 5 253 IPR000308 -
Hepe10g0481 264 MobiDBLite consensus disorder prediction 245 264 - -
Hepe10g0481 264 SUPERFAMILY 14-3-3 protein 11 243 IPR036815 -
Hepe10g0481 264 PANTHER 14-3-3 PROTEIN 11 246 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Hepe10g0481 264 MobiDBLite consensus disorder prediction 246 264 - -
Hepe10g0481 264 FunFam 14-3-3 protein epsilon 8 254 - -
Hepe10g0481 264 Coils Coil 17 37 - -
Hepe10g0481 264 ProSitePatterns 14-3-3 proteins signature 2. 223 242 IPR023409 -
Hepe10g0481 264 Pfam 14-3-3 protein 17 241 IPR023410 -
Hepe10g0481 264 ProSitePatterns 14-3-3 proteins signature 1. 51 61 IPR023409 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g0409 Hepe-Chr10:4563580 Hepe10g0481 Hepe-Chr10:5581578 5.66e-123 dispersed
Hepe10g0481 Hepe-Chr10:5581578 Hepe10g1790 Hepe-Chr10:54650954 1.65e-116 dispersed
Hepe02g0894 Hepe-Chr2:10714780 Hepe10g0481 Hepe-Chr10:5581578 1.61e-142 transposed
Hepe04g0585 Hepe-Chr4:58800543 Hepe10g0481 Hepe-Chr10:5581578 5.78e-15 transposed
Hepe01g2137 Hepe-Chr1:86024202 Hepe10g0481 Hepe-Chr10:5581578 4.57e-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0481 K06630 - csv:101220164 500.36