Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0543 ATGGCTACTGAGGGAAGTCCCATGACTGATATCTCAACAGATGGGGACACAGATGAAAAAAGCCGGAGGACTGATAGAGGGCAACCTCTTACTCTGGCTTCTGATTCCAGTGACAGATCAAAGGATAAAAGTGATCAGAAGACTCTTCGCCGGCTAGCACAAAATCGTGAGGCTGCTAGGAAAAGCCGATTGAGGAAAAAGGCATATGTTCAACAATTAGAGAGCAGTCGTTTAAAGTTGACACAACTAGAGCAGGAGCTTCAGCGAGCACGGCAGCAGGGAATTTTCATATCAAGCGCAGGTGACCAGACCCATTCAATGAGTGGAAATGGAGCCATGGCATTTGATGTAGAATATGCTCGATGGCTTGAAGATCACAACCGTCAAATGAACGAATTGAGATCAGCAGTTAATTCCCATGCAAGTGACCCGGAACTGCGTATTGTTGTCGATGGCATCTTGGTTCATTATGATGAGCTTTTCAGGCTCAAAGGAAATGCAGCAAAGGCTGACGTTTTCCATTTATTATCAGGCATGTGGAAAACACCTGCAGAAAGATGTTTTCTTTGGCTCGGGGGTTTTCGTTCATCCGAGCTCCTAAAGCTTCTTGTAAATCAATTGGAGCCTCTAACAGAGCAGCAGTTGGTGGGAATCACAAACTTACAGCAATCATCACAGCAGGCAGAAGATGCATTATCACAAGGGATGGAGGCCTTGCAACAGTCCCTAGCAGAGACGTTGTCGAGTGGTTCTCTCGGCTCCTCCGGTTCGTCAGGGAACGTTGCAAACTACATGGGTCAAATGGCCATGGCCATGGGTAAACTCGGGACCCTCGAGGGTTTTATACGCCAAGCCGATAATCTGCGACAACAGACACTTCAACAAATGCACCGAATATTGACAACTCGTCAGTCTGCTCGTGCGCTTCTCGCCATACACGACTACTTCTCCAGGCTACGAGCTCTTAGTTCTCTCTGGCTTGCTCGTCCCAGAGAATAA 999 47.45 MATEGSPMTDISTDGDTDEKSRRTDRGQPLTLASDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSAGDQTHSMSGNGAMAFDVEYARWLEDHNRQMNELRSAVNSHASDPELRIVVDGILVHYDELFRLKGNAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6451084 6456501 + Hsped.10g05430.1 Hepe10g0543 581090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0543 332 Gene3D - 46 98 - -
Hepe10g0543 332 Coils Coil 123 143 - -
Hepe10g0543 332 PANTHER TRANSCRIPTION FACTOR TGA9 20 332 - -
Hepe10g0543 332 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe10g0543 332 FunFam BZIP family transcription factor 46 95 - -
Hepe10g0543 332 Coils Coil 66 93 - -
Hepe10g0543 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g0543 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g0543 332 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g0543 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe10g0543 332 MobiDBLite consensus disorder prediction 1 49 - -
Hepe10g0543 332 SMART brlzneu 43 106 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g0543 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0968 Hepe-Chr1:74181920 Hepe10g0543 Hepe-Chr10:6451084 1.86e-172 dispersed
Hepe02g2705 Hepe-Chr2:75059374 Hepe10g0543 Hepe-Chr10:6451084 7.81e-140 dispersed
Hepe05g0553 Hepe-Chr5:7671292 Hepe10g0543 Hepe-Chr10:6451084 6.28e-111 dispersed
Hepe05g0675 Hepe-Chr5:11186778 Hepe10g0543 Hepe-Chr10:6451084 5.06e-143 dispersed
Hepe07g0658 Hepe-Chr7:7560779 Hepe10g0543 Hepe-Chr10:6451084 1.83e-94 dispersed
Hepe08g0225 Hepe-Chr8:1986057 Hepe10g0543 Hepe-Chr10:6451084 3.53e-109 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56464 PF14144 DOG1 6.90E-32 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0543 K14431 - csv:101213210 586.645