Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0557 ATGAGAACGGGGAAAAGCAATCAGGAAGACGAAGAGTACGAGGAAGACGAACTGGTTGCTAAAAGAGAGGGGCCTTCTTCTACTTCCAACGCTAATAGTAGCATCGGAAACAGCAAAGATGGGAAGAACAACGATAAGGCTAATGCCATGCGGTCGAAGCACTCTGTCACGGAGCAGCGCAGAAGAAGCAAGATAAATGAGAGATTCCAGATTTTGAGAGATCTTATACCTCACAGCGATCAAAAGAGAGATACTGCATCATTCTTATTGGAGGTGATTGAGTATGTTCAGTATTTACAGGAAAGGGTGCAGAAATTCGAGGGTTCATATCAGAATTGGAGTGGGGAACCTACTAAGTTAATACCATGGAGAAATAGTCATTGGCGTATGCAGACTTTTGTTGGCCATCCACAGTCTGTAAAAAATGGTTCTGCTTCAGGACCAACGTATTCAGGGAAGTTTGATGACAACAACATTTCAATTTCACCAGCCATGCTTAGCTCACAAAACCCTCTCGAGTCCCATGTAGGCAGAGATATTCTACAGGATGCTGACATAACAAATAAAGTTCCACTTCCCATGTCACTGGAAGGAAATATACATGCTTCTATCCGTAGTGACAATGTTCTTGATCAATCCTTCCACATTCCAATTTCTGATGCACAGACAACAGAGTGTCCCATCACCAACAATAATGCATCAAGCCAACCAGAGGAGATGGCTATTGAAGGGGGGACAATAAGCGTTTCGAGTCTTTATTCAGAAGGGTTATTGAACAGCTTGACTCAAGCTCTGCAGAATACTGGACTGGATTTGTCACAGGCTAGTATCTCCGTTCAGATTGATCTAGGCAAGAGAGCAAATAAGGGGACGCCATTTGGAACGCCTATTTTTAAGGAAACTGGGAATCCTCCCTCTGGCCACCCAGCAATGGCACATGTAGTAGGGGACCTGGGCAGCGGAGACGACTCAGATCAAGCTAAAAAGCGGCTAAGGACATGA 1002 44.51 MRTGKSNQEDEEYEEDELVAKREGPSSTSNANSSIGNSKDGKNNDKANAMRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQERVQKFEGSYQNWSGEPTKLIPWRNSHWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLSSQNPLESHVGRDILQDADITNKVPLPMSLEGNIHASIRSDNVLDQSFHIPISDAQTTECPITNNNASSQPEEMAIEGGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGTPFGTPIFKETGNPPSGHPAMAHVVGDLGSGDDSDQAKKRLRT 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6628080 6634142 + Hsped.10g05570.1 Hepe10g0557 581104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0557 333 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 5 333 IPR044295 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0046983(InterPro)
Hepe10g0557 333 MobiDBLite consensus disorder prediction 44 62 - -
Hepe10g0557 333 MobiDBLite consensus disorder prediction 300 333 - -
Hepe10g0557 333 Gene3D - 47 119 IPR036638 GO:0046983(InterPro)
Hepe10g0557 333 MobiDBLite consensus disorder prediction 23 43 - -
Hepe10g0557 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 119 IPR036638 GO:0046983(InterPro)
Hepe10g0557 333 SMART finulus 55 105 IPR011598 GO:0046983(InterPro)
Hepe10g0557 333 FunFam BHLH domain class transcription factor 47 119 - -
Hepe10g0557 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 99 IPR011598 GO:0046983(InterPro)
Hepe10g0557 333 CDD bHLH_AtBIM_like 48 124 - -
Hepe10g0557 333 MobiDBLite consensus disorder prediction 1 62 - -
Hepe10g0557 333 Pfam Helix-loop-helix DNA-binding domain 51 100 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0909 Hepe-Chr2:10950761 Hepe10g0557 Hepe-Chr10:6628080 9.84e-60 dispersed
Hepe09g0297 Hepe-Chr9:2571322 Hepe10g0557 Hepe-Chr10:6628080 1.33e-66 dispersed
Hepe10g0557 Hepe-Chr10:6628080 Hepe07g2436 Hepe-Chr7:68737585 1.02e-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56465 PF00010 HLH 1.60E-13 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0557 - - - 0.0