Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g0557 | ATGAGAACGGGGAAAAGCAATCAGGAAGACGAAGAGTACGAGGAAGACGAACTGGTTGCTAAAAGAGAGGGGCCTTCTTCTACTTCCAACGCTAATAGTAGCATCGGAAACAGCAAAGATGGGAAGAACAACGATAAGGCTAATGCCATGCGGTCGAAGCACTCTGTCACGGAGCAGCGCAGAAGAAGCAAGATAAATGAGAGATTCCAGATTTTGAGAGATCTTATACCTCACAGCGATCAAAAGAGAGATACTGCATCATTCTTATTGGAGGTGATTGAGTATGTTCAGTATTTACAGGAAAGGGTGCAGAAATTCGAGGGTTCATATCAGAATTGGAGTGGGGAACCTACTAAGTTAATACCATGGAGAAATAGTCATTGGCGTATGCAGACTTTTGTTGGCCATCCACAGTCTGTAAAAAATGGTTCTGCTTCAGGACCAACGTATTCAGGGAAGTTTGATGACAACAACATTTCAATTTCACCAGCCATGCTTAGCTCACAAAACCCTCTCGAGTCCCATGTAGGCAGAGATATTCTACAGGATGCTGACATAACAAATAAAGTTCCACTTCCCATGTCACTGGAAGGAAATATACATGCTTCTATCCGTAGTGACAATGTTCTTGATCAATCCTTCCACATTCCAATTTCTGATGCACAGACAACAGAGTGTCCCATCACCAACAATAATGCATCAAGCCAACCAGAGGAGATGGCTATTGAAGGGGGGACAATAAGCGTTTCGAGTCTTTATTCAGAAGGGTTATTGAACAGCTTGACTCAAGCTCTGCAGAATACTGGACTGGATTTGTCACAGGCTAGTATCTCCGTTCAGATTGATCTAGGCAAGAGAGCAAATAAGGGGACGCCATTTGGAACGCCTATTTTTAAGGAAACTGGGAATCCTCCCTCTGGCCACCCAGCAATGGCACATGTAGTAGGGGACCTGGGCAGCGGAGACGACTCAGATCAAGCTAAAAAGCGGCTAAGGACATGA | 1002 | 44.51 | MRTGKSNQEDEEYEEDELVAKREGPSSTSNANSSIGNSKDGKNNDKANAMRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQERVQKFEGSYQNWSGEPTKLIPWRNSHWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLSSQNPLESHVGRDILQDADITNKVPLPMSLEGNIHASIRSDNVLDQSFHIPISDAQTTECPITNNNASSQPEEMAIEGGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGTPFGTPIFKETGNPPSGHPAMAHVVGDLGSGDDSDQAKKRLRT | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6628080 | 6634142 | + | Hsped.10g05570.1 | Hepe10g0557 | 581104 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g0557 | 333 | PANTHER | BES1-INTERACTING MYC-LIKE PROTEIN | 5 | 333 | IPR044295 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0046983(InterPro) | |
Hepe10g0557 | 333 | MobiDBLite | consensus disorder prediction | 44 | 62 | - | - | |
Hepe10g0557 | 333 | MobiDBLite | consensus disorder prediction | 300 | 333 | - | - | |
Hepe10g0557 | 333 | Gene3D | - | 47 | 119 | IPR036638 | GO:0046983(InterPro) | |
Hepe10g0557 | 333 | MobiDBLite | consensus disorder prediction | 23 | 43 | - | - | |
Hepe10g0557 | 333 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 47 | 119 | IPR036638 | GO:0046983(InterPro) | |
Hepe10g0557 | 333 | SMART | finulus | 55 | 105 | IPR011598 | GO:0046983(InterPro) | |
Hepe10g0557 | 333 | FunFam | BHLH domain class transcription factor | 47 | 119 | - | - | |
Hepe10g0557 | 333 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 49 | 99 | IPR011598 | GO:0046983(InterPro) | |
Hepe10g0557 | 333 | CDD | bHLH_AtBIM_like | 48 | 124 | - | - | |
Hepe10g0557 | 333 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Hepe10g0557 | 333 | Pfam | Helix-loop-helix DNA-binding domain | 51 | 100 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0909 | Hepe-Chr2:10950761 | Hepe10g0557 | Hepe-Chr10:6628080 | 9.84e-60 | dispersed | |
Hepe09g0297 | Hepe-Chr9:2571322 | Hepe10g0557 | Hepe-Chr10:6628080 | 1.33e-66 | dispersed | |
Hepe10g0557 | Hepe-Chr10:6628080 | Hepe07g2436 | Hepe-Chr7:68737585 | 1.02e-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56465 | PF00010 | HLH | 1.60E-13 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g0557 | - | - | - | 0.0 |