Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe10g0570 | ATGTCATCACAGAGCTTCAACACCCTTCTTCTCCATTTCCCCATTTCCATTTCCCAAAGCTTCGAAGCTCTTCTCTTAACCCTTCTTCTAATCTCCATTTTCGCCTTCCTCCTCCACCCGGGCGGCCTGGCTTGGGCTGTTTCCAAGTCCAGAACCGCCGCCATCGCCGCCATCCCCGGCCCCTCCGGCCTCCCCTTCGTCGGCCTCCTCCACATCTTCACCCTCTCCAAAACCCCCCACAGATCCCTCGCCGCCCTCTCCACAAAATTCCAAGCAAACCCTTTAATGGCCTTCTCAATCGGCCTCACCAAATTCGTCATTTCCACCAACCCCGATTTCGCCAAAGAGATTCTCAATAGCGCTTCCTTCGCCGACAGACCCGTCAAGGAATCTGCTTATCAACTGCTTTTCCACAGAGCAATGGGGTTTGCTCCTTATGGTGAGTATTGGAGGAACTTAAGAAGGATTTCAGCTACTTATTTGTTTAGTCCCAAAAGAATCGCTTCCTTTGGAATGTTTAGACAAGAAGTTGGTGTTCAAATGATCTGCGAGATCGCCAAATCTATGAGTTTGAGAGGGGATGTTAGTGTTAAACAAATTCTCCATTTTGGGTCTTTGAATAATGTTATGATGACGGTTTTTGGGAAGTGGTTTGAGTTTAGTGGTGGTCAAAAGGAGGGGGTTGAGCTTGAGGAATTGGTTAGTGAAGGGTTTGAATTGCTTGGGATTTTTAATTGGAGTGACCATTTTCCATTTTTGGGTTGGTTGGATTTGCAAGGTGTGAGGAAGAGAGGTAGAGTTTTGGCTTCTAAGGTTAATGTTTTTGTTGGGAAAATCATTGAGGAACATAGAATGAACAGGAAAGTCAACGGACAAGAACAACAACAAGAACATAATAAAGACTTTGTTGATGTACTACTTGATTTGGAGAAGGAGGACAAACTCTCAGATTCTGACATGATTGCTGTTCTTTGGGAAATGATTTTTCGAGGAACTGACACCGTAGCCATACTTTTGGAATGGATTTTAGCAAGAATGGTGATCCACCCCGAAATTCAAACCAAAGTTCAAAACGAAATAGATTCAATAATAGGCGAAAAATTCAGACCCATTTCGGATTCAGACATCCCAAATCTTCCATATCTTCAATCAATCGTTAAAGAGTGCTTAAGAATGCACCCACCGGGGCCACTTCTTTCATGGGCTCGTCTCGCCGTTGACGACGTGCACGTCGGTGGGAGCTTGATTCCGGCAGGCACGACGGCGATGGTGAACATGTGGGCAATAACCCATAATGATCGGGTTTGGTCAGAACCCGAGAAATTTGACCCAAGTAGGTTCATGGAAGAGGAAATTAGTGTTTTGGGAAGTGATTTGAGATTGGCTCCGTTTGGGGCAGGGAGAAGGGTTTGCCCGGGAAAGGCAATGGGATTGGCTACTGTGAATCTGTGGTTGGGGCAGTTGCTTCAAGCTTACAAATGGGTTGGTTGTTCTGATGGGGACCTTAATAATAATGGCGTTGACTTGTCTGAATGCCTTAAACTTTCGCTCGAAATGGAAACTCCATTGGTTTGCAGAGCCATTGCTAGGAATTGCTAG | 1599 | 45.72 | MSSQSFNTLLLHFPISISQSFEALLLTLLLISIFAFLLHPGGLAWAVSKSRTAAIAAIPGPSGLPFVGLLHIFTLSKTPHRSLAALSTKFQANPLMAFSIGLTKFVISTNPDFAKEILNSASFADRPVKESAYQLLFHRAMGFAPYGEYWRNLRRISATYLFSPKRIASFGMFRQEVGVQMICEIAKSMSLRGDVSVKQILHFGSLNNVMMTVFGKWFEFSGGQKEGVELEELVSEGFELLGIFNWSDHFPFLGWLDLQGVRKRGRVLASKVNVFVGKIIEEHRMNRKVNGQEQQQEHNKDFVDVLLDLEKEDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVIHPEIQTKVQNEIDSIIGEKFRPISDSDIPNLPYLQSIVKECLRMHPPGPLLSWARLAVDDVHVGGSLIPAGTTAMVNMWAITHNDRVWSEPEKFDPSRFMEEEISVLGSDLRLAPFGAGRRVCPGKAMGLATVNLWLGQLLQAYKWVGCSDGDLNNNGVDLSECLKLSLEMETPLVCRAIARNC | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 6826811 | 6829107 | + | Hsped.10g05700.1 | Hepe10g0570 | 581117 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe10g0570 | 532 | FunFam | Cytochrome P450 78A5 | 50 | 530 | - | - | |
| Hepe10g0570 | 532 | PRINTS | E-class P450 group I signature | 319 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | E-class P450 group I signature | 204 | 222 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | E-class P450 group I signature | 461 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | E-class P450 group I signature | 425 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | E-class P450 group I signature | 383 | 401 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | E-class P450 group I signature | 471 | 494 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | E-class P450 group I signature | 339 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | Gene3D | Cytochrome P450 | 45 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PANTHER | CYTOCHROME P450 78A7-RELATED | 21 | 527 | IPR051996 | - | |
| Hepe10g0570 | 532 | SUPERFAMILY | Cytochrome P450 | 58 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 464 | 473 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | P450 superfamily signature | 384 | 395 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | P450 superfamily signature | 462 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | PRINTS | P450 superfamily signature | 330 | 347 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | Pfam | Cytochrome P450 | 59 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0570 | 532 | CDD | CYP78 | 92 | 523 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe03g0790 | Hepe-Chr3:24342393 | Hepe10g0570 | Hepe-Chr10:6826811 | 3.49e-164 | dispersed | |
| Hepe10g0570 | Hepe-Chr10:6826811 | Hepe10g1518 | Hepe-Chr10:51937015 | 1.05e-183 | dispersed | |
| Hepe10g0570 | Hepe-Chr10:6826811 | Hepe07g2450 | Hepe-Chr7:68848640 | 4.58e-236 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe10g0570 | K20619 | - | csv:101221468 | 822.387 |