Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0572 ATGCCGAGCATTTCGACCCTCTATTCCATTCAAGAAGTATCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTATACGACTTGACGTCATATTTGGACGAGCATCCTGGTGGGGATGATGTTATTGTTGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGTTGGTCACAGCAAAGATGCCAGAGAGCTGATGGAGAAGTTCTATATCGGTGAGCTTGATACATCTTCCTTAGAAAGCCCAGAACTCGAAACGGAGCAACTAGTAGACGGTTATGCAGCTCAGGTTCAGGCCTTGACCAAGCAATACTGGGCGGCTCCTGTTGCAGTACTTGGTATTTCTGCAGTACTTGGCTTGTTATACTTGGGCAAAAAGTGA 399 46.37 MPSISTLYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDVGHSKDARELMEKFYIGELDTSSLESPELETEQLVDGYAAQVQALTKQYWAAPVAVLGISAVLGLLYLGKK 132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6854369 6856542 - Hsped.10g05720.1 Hepe10g0572 581119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0572 132 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Hepe10g0572 132 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Hepe10g0572 132 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Hepe10g0572 132 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Hepe10g0572 132 Gene3D - 3 86 IPR036400 -
Hepe10g0572 132 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Hepe10g0572 132 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Hepe10g0572 132 PANTHER CYTOCHROME B5 6 114 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Hepe10g0572 132 SMART Cyt_b5_2 8 81 IPR001199 -
Hepe10g0572 132 FunFam Cytochrome b5 type B 3 85 - -
Hepe10g0572 132 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 81 IPR001199 -
Hepe10g0572 132 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1849 Hepe-Chr6:69606242 Hepe10g0572 Hepe-Chr10:6854369 1.05e-31 dispersed
Hepe08g2621 Hepe-Chr8:68185730 Hepe10g0572 Hepe-Chr10:6854369 4.04e-21 dispersed
Hepe10g0572 Hepe-Chr10:6854369 Hepe03g0349 Hepe-Chr3:5042167 6.87e-35 transposed
Hepe10g0572 Hepe-Chr10:6854369 Hepe05g1755 Hepe-Chr5:67866386 5.00e-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0572 K23490 - csv:101220127 225.713