Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0575 ATGGACCCTTCACGAGGGGTAAAGAAGAGAGGTCATGGAAATCGTTCTTGGATAAAGATTGATCAGGAAGGGAACTCAGTAGTTTTGGAACTTGAGAAGGCTACAATAATGAGGCATTGTTCTTTACCTTCAAGAGATATGCGACTTTTAGATCCTCTCTTCCTTTGTCCATCCACAATTCTTGGAAGGGAGAAAGCAATTGTTGTCAGTCTCGAGCAAATTCGGTGTGTAATCACATCTGAGGAGGTTTTTCTAATGAACTCCTTAGATGGATGTGCTGCACAGTACAAGTCAGAACTATGCAAGCGTGTCCAGGCAAATAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGGGCACTGGAGCTGGCGCTGGAACTTACTTGCTCATTTCTTGACACTCAGGTGAAGGGGATGGAAATGGAGATATACCCTCTACTGGATGATTTAGCATCTTCAATAAACACCCTTAATCTTGAAAGAGTTCGAAGATTTAAAGGCAACCTTCTGACCTTGACTCAACAAGTGCAAAAGGTGCGTGATGAAATTGAACATCTGATGGATGACGATGGGGATATGGCTGAGATGCATCTGACAGAGAAGAAACAAAGATTGGAGGCTAACATCCGAAGTAACTTGTATCTCGAAACTAGTTTCTTTGGGAAGCAGCTACCAAAATCAGCTCCTGTTTCGCCAGTGGCTTCTACCAATGGAACTAATAAATTACAAAGGGCTTTTAGCAGTATTGTGAACTCAAGCAGCTTGGTGAGTTCATCGAACAGTGGAGATAACATCGAACAATTGGAGATGTTGCTCGAAGCATACTTTGTGGTCATTGACGACATGCTCAGTAAATTGTTATCGCTCAAAGAATCTATAGATGACACAGAAGATCTGATCAACATTAAACTGGGCAACGTTCAGAACCAGCTGATACAATTTCAGTTGCTTTTTACTGCAGCTACATTCTTGGCTACGATGTTTGCGGCGTTAACGGCAGTTTTTGGCATGAATTTTGTCGACGATGTCTTCGAGCATCCGACTTCTTTCCAGTGGATAGTTTACTTGACCTTGATTGCCTGTGGCCTTGTGTATTTCGCTTTTCTATTATATTTTAGGTACAAGAAAATCTTCCCATTGTAA 1143 41.47 MDPSRGVKKRGHGNRSWIKIDQEGNSVVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCVITSEEVFLMNSLDGCAAQYKSELCKRVQANKDQSDDLPFEFRALELALELTCSFLDTQVKGMEMEIYPLLDDLASSINTLNLERVRRFKGNLLTLTQQVQKVRDEIEHLMDDDGDMAEMHLTEKKQRLEANIRSNLYLETSFFGKQLPKSAPVSPVASTNGTNKLQRAFSSIVNSSSLVSSSNSGDNIEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQLLFTAATFLATMFAALTAVFGMNFVDDVFEHPTSFQWIVYLTLIACGLVYFAFLLYFRYKKIFPL 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6876209 6881863 + Hsped.10g05750.1 Hepe10g0575 581122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0575 380 Coils Coil 169 189 - -
Hepe10g0575 380 Gene3D Magnesium transport protein CorA, transmembrane region 91 311 - -
Hepe10g0575 380 Pfam Magnesium transporter MRS2-like 20 206 - -
Hepe10g0575 380 Gene3D - 4 88 - -
Hepe10g0575 380 FunFam Magnesium transporter MRS2-1 5 88 - -
Hepe10g0575 380 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 377 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Hepe10g0575 380 CDD Mrs2_Mfm1p-like 17 377 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1289 Hepe-Chr2:16151263 Hepe10g0575 Hepe-Chr10:6876209 1.06e-127 dispersed
Hepe10g0575 Hepe-Chr10:6876209 Hepe03g0248 Hepe-Chr3:3170359 4.11e-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0575 K16075 - csv:101220835 644.81