Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0586 ATGGACGACGATTCACACACCAACCTCCATAATCCTCCACCTGACTTCTCCACTACTACCACCGCCGACGATTCCTCTACTGATTGGACCAACAACGCACTCACCACCACCGATGCTGTCTACTTCTTCTCCGCCGATACCGAAACCACCATCCTCACTGAATTCGGATGGAATTTTCACTCCCTCGATGTTCAACCTACCCGATTCATCAACTCTGACCGGATCGCTACCGATCACAACGCTGATTCCGCTGGAACCTCCGCCAAACCAATCGAGGACAACGGCGGCGGATTATTACTCCAGAGCCCTGACGCTGATCCTGTTCCGGTTGCGTCGAATCCTTCATTGTCTTCCAGCTCTAGCGGAGAACCACCGCCGGAGAAACAGCCTGAGATTATTCCGCGGAAGGTGAAAAAGAAGGGGCAAAAGCGAATCAGGCAGCCACGATTTGCTTTCATGACCAAAAGCGAAGTTGATCATCTTGAAGATGGCTACCGTTGGAGGAAATATGGGCAAAAGGCTGTCAAGAACAGCCCATTTCCTAGCAGGAGTTACTATAGGTGCACAAACAGTAAATGCGGTGTGAAGAAAAGGGTAGAACGGTCGTGTGAAGATCCAAGCGTTGTGATAACAACATATGAAGGCCAGCACTGTCATCACACCGTTGGATTCCCTCGAGGTGGATTCAACATGGCTCATGAAGCAGCTTTTGGCTCTCAATTTTCACCTCATCAAATCTCACACTTTTATAATTACCCTCAAACAACGTTAACTACTCACCCACCGCCGCCCACAAATAATAACCCTCCGCCTTTGCCCATTCAACAAGACCAACAACCAACAAACTCACTCCAAGTCGCTGCTTCTTCCGACGACGGCTTACTAGGCGATATCGTACCGCCCGGCATGCGTAGAAGAACATGA 924 49.78 MDDDSHTNLHNPPPDFSTTTTADDSSTDWTNNALTTTDAVYFFSADTETTILTEFGWNFHSLDVQPTRFINSDRIATDHNADSAGTSAKPIEDNGGGLLLQSPDADPVPVASNPSLSSSSSGEPPPEKQPEIIPRKVKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNSKCGVKKRVERSCEDPSVVITTYEGQHCHHTVGFPRGGFNMAHEAAFGSQFSPHQISHFYNYPQTTLTTHPPPPTNNNPPPLPIQQDQQPTNSLQVAASSDDGLLGDIVPPGMRRRT 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7122456 7127269 + Hsped.10g05860.1 Hepe10g0586 581133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0586 307 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 113 255 IPR044810 GO:0003700(InterPro)
Hepe10g0586 307 FunFam WRKY transcription factor 57 147 222 - -
Hepe10g0586 307 MobiDBLite consensus disorder prediction 253 307 - -
Hepe10g0586 307 SMART WRKY_cls 161 221 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g0586 307 MobiDBLite consensus disorder prediction 257 276 - -
Hepe10g0586 307 Pfam WRKY DNA -binding domain 162 219 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g0586 307 SUPERFAMILY WRKY DNA-binding domain 153 220 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g0586 307 MobiDBLite consensus disorder prediction 1 27 - -
Hepe10g0586 307 MobiDBLite consensus disorder prediction 10 27 - -
Hepe10g0586 307 Gene3D WRKY domain 148 215 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g0586 307 MobiDBLite consensus disorder prediction 79 146 - -
Hepe10g0586 307 MobiDBLite consensus disorder prediction 111 125 - -
Hepe10g0586 307 ProSiteProfiles WRKY domain profile. 156 222 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1368 Hepe-Chr5:62322167 Hepe10g0586 Hepe-Chr10:7122456 4.12e-40 dispersed
Hepe08g0620 Hepe-Chr8:5443619 Hepe10g0586 Hepe-Chr10:7122456 7.00e-35 dispersed
Hepe10g0218 Hepe-Chr10:2209337 Hepe10g0586 Hepe-Chr10:7122456 1.69e-16 dispersed
Hepe10g0586 Hepe-Chr10:7122456 Hepe10g0780 Hepe-Chr10:14879773 5.85e-31 dispersed
Hepe10g0586 Hepe-Chr10:7122456 Hepe03g0037 Hepe-Chr3:425163 1.19e-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56468 PF03106 WRKY 1.90E-22 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0586 - - - 0.0