Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0613 ATGGCGACGCAAGTTGAGCCTCCAAATGGGGTTAGATCCCCAGGAAAGCATTACTATTCAATGTGGCAGACATTGTTTGAGATTGATACTAAATATGTGCCCATCAAGCCTATTGGTCGAGGGGCGTATGGTATTGTGTGTTCTTCTGTGAATAGGGAAACAAACGAGAAAGTTGCGATAAAGAGGATACATAATGCGTTTGAGAATCGCATCGATGCCCTTCGGACTTTGCGCGAATTGAAGCTCCTTAGGCATCTTCGCCATGAAAACGTGATATGTTTGAAAGATGTGATGATGCCTATCCATAGGAGAAGTTTTAAAGATGTTTATTTGGTTTATGAACTGATGGATACGGATCTACATCAGATTATCAAGTCTTCTCAAACTCTTACTAATGACCACTGCCAATATTTCCTGTTTCAGTTGCTCCGAGGCCTAAAATATCTGCACTCTGCAAACATTCTACATCGAGACTTGAAGCCCGGGAACCTCCTTGTCAATGCAAATTGTGATCTCAAGATATGTGATTTTGGGTTAGCGCGTACGAGCAACGGCAAGAATCAATTTATGACAGAGTATGTTGTCACTCGCTGGTATCGAGCCCCAGAACTGCTGCTCTGCTGCGAGAATTATGGGACATCAATTGATGTGTGGTCTGTAGGATGCATCTTTGCCGAGCTTCTCGGTAGGAAACCTATCTTCCCTGGTACCGAATGTTTGAATCAACTCAAATTGATAATTAACATACTGGGTAGCCAGAGAGAGGAAGATCTTGAGTTCATAGACAATCCAAAGGCAAGGAGGTATATAAAATCCCTCCCATACTCTCCTGGGGCTCCTCTTTTCCGTCTTTATCCGAACGCTCATCCTCTTGCGATTGATCTGCTACAAAAGATGCTTGTCTTTGACCCATCAAAGAGGATTAGTGTAACTGAAGCATTGCATCATCCTTACATGTCCCCACTGTATGATCCAAACAGCAATCCTCCAGCTCAGGTACCAATCGATCTCGACATAGATGAGGAACTTGGAGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCACCCTGAGGATCTGGAAGAACACGCAGAAATGACATGTTTCCACCCCGGACCTACTACGAGTAGTACCGTGGCGTATTCTTGA 1161 43.67 MATQVEPPNGVRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSQREEDLEFIDNPKARRYIKSLPYSPGAPLFRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALHHPYMSPLYDPNSNPPAQVPIDLDIDEELGEEMIREMMWKEMLHYHPEDLEEHAEMTCFHPGPTTSSTVAYS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7570656 7573267 - Hsped.10g06130.1 Hepe10g0613 581160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0613 386 FunFam Mitogen-activated protein kinase 18 126 - -
Hepe10g0613 386 FunFam Mitogen-activated protein kinase 116 345 - -
Hepe10g0613 386 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0613 386 CDD STKc_TEY_MAPK 26 361 - -
Hepe10g0613 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g0613 386 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Hepe10g0613 386 Pfam Protein kinase domain 34 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0613 386 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524(InterPro)
Hepe10g0613 386 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Hepe10g0613 386 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0613 386 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Hepe10g0613 386 SMART serkin_6 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g0613 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 357 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1300 Hepe-Chr4:68571890 Hepe10g0613 Hepe-Chr10:7570656 1.66e-34 dispersed
Hepe08g1323 Hepe-Chr8:15073255 Hepe10g0613 Hepe-Chr10:7570656 1.88e-35 dispersed
Hepe10g0088 Hepe-Chr10:838454 Hepe10g0613 Hepe-Chr10:7570656 4.18e-45 dispersed
Hepe10g0613 Hepe-Chr10:7570656 Hepe10g1137 Hepe-Chr10:45175894 1.53e-139 dispersed
Hepe10g0613 Hepe-Chr10:7570656 Hepe07g0706 Hepe-Chr7:8449842 9.41e-210 wgd
Hepe10g0613 Hepe-Chr10:7570656 Hepe07g2488 Hepe-Chr7:69223567 7.94e-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73170 PF00069 Pkinase 1.40E-71 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0613 K20535 - csv:101213478 753.051