Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe10g0620 | ATGCCCTCGCTCTGCTTTTGGTGCTTTGCTGCTGCCATCGGCGGCGGCGCTGCCCTCTCCATCGTTGTCTTCCAATTTTCTGTGAAGAATAAGGCGCGGCGGCGGCCGAGTTCTGATTCTCCTCCGCCGGGAAGCAGAGGTTTGCCTCTCATCGGAGAGACGCTCCAGTTCATGGCCGCCGTCAATAGCAGCAACGGCGTTTATGATTTTGTCAGAATCCGCTGCCTCCGATATGGAAGATGCTTTAAGACTCGAATATTTGGGGAGACGCATGTATTTGTTTCGAGCACTGAATCAGCGAAGTTGATACTCAACGACGGCGGAGGTAGCTTCACCAAAAAGTACATTAGATCCATAGCGGAGCTAGTCGGCCACCAAAGTTTGCTTTGTGCTTCACATACGCACCACAAATTTTTACGCGGTCGCCTCATCAACTTGTTCTCCGCCAATTTTTTGGCTTCTTTCGTCACTCAGTTTGATCAACAAATCGTTCAAGCGCTACGATGCTGGGAAAGTGGTTCCACCATTATTCTCCTCAACGAAGCCCTCGAGATAACATGCAAAGCAATGTGCAAGATGCTGATGAGCTTAGAGAACGAAAACGAATTAGAAGCATTGCAGAAGGAGATAGCTTTTGTATGTGAAGCTATGCTCGCATTTCCATGGCGGTTTCCGGGGACAAGATTCCACAACGGCCTCAAGGCAAGAAGAAGAATCATTAAGAAACTCGAAACCGCGATTCGGGAGAGACGAGGATCGGAAACTCAGCACGAGGATTTCCTTCAGAGGCTGTTGACGGAGGAGGAGGATGGCGGCGGTGGAGGAGCGCTGTCGGATGCAGAGATCGGAGATAATATATTGACGATGTTGATCGCCGGGCAGGATACGACCGCGAGTGCCATCACTTGGATGGTGAAGTTCTTGGATGAGAATCAGGACGTCCTTCAAAAACTAAGGGATGAACAATTTAAAATATTGGGAAAACAACAAGATCATGGGAGTTGTTTCCTTACGTTGGAAGATCTTGGCAATATGCCCTATGCTGCTAAGGTAGTAAAAGAATCCCTGAGGTTAGCGTCTGTGGTGCCATGGTTCCCAAGGCTAGCAGGTTACAAAATCAAGAAAGGTTGGAATGTTAACATTGATGTAAGATCACTACACACAGATCCTTCTGTCTACGATCATCCTACCAAGTTCAATCCTTCCAGGTTTGATGAAGAGGCAAAACCCTATAGTTTTTTAGGTTTTGGAATGGGAGGGAGGCAATGTCTAGGGATGAACTTGGCCAAAGCCATGATGCTTGTCTTTCTTCACCGCTTGGTGACTTCTTACAGGTGA | 1338 | 47.91 | MPSLCFWCFAAAIGGGAALSIVVFQFSVKNKARRRPSSDSPPPGSRGLPLIGETLQFMAAVNSSNGVYDFVRIRCLRYGRCFKTRIFGETHVFVSSTESAKLILNDGGGSFTKKYIRSIAELVGHQSLLCASHTHHKFLRGRLINLFSANFLASFVTQFDQQIVQALRCWESGSTIILLNEALEITCKAMCKMLMSLENENELEALQKEIAFVCEAMLAFPWRFPGTRFHNGLKARRRIIKKLETAIRERRGSETQHEDFLQRLLTEEEDGGGGGALSDAEIGDNILTMLIAGQDTTASAITWMVKFLDENQDVLQKLRDEQFKILGKQQDHGSCFLTLEDLGNMPYAAKVVKESLRLASVVPWFPRLAGYKIKKGWNVNIDVRSLHTDPSVYDHPTKFNPSRFDEEAKPYSFLGFGMGGRQCLGMNLAKAMMLVFLHRLVTSYR | 445 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 7700552 | 7711757 | + | Hsped.10g06200.1 | Hepe10g0620 | 581167 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe10g0620 | 445 | PANTHER | CYTOCHROME P450 26 | 42 | 444 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Hepe10g0620 | 445 | PRINTS | E-class P450 group I signature | 281 | 298 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | E-class P450 group I signature | 413 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | E-class P450 group I signature | 349 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | E-class P450 group I signature | 301 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | E-class P450 group I signature | 382 | 406 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | E-class P450 group I signature | 423 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | Pfam | Cytochrome P450 | 42 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | P450 superfamily signature | 350 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | P450 superfamily signature | 423 | 434 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | P450 superfamily signature | 414 | 423 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | PRINTS | P450 superfamily signature | 292 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | CDD | CYP90-like | 74 | 445 | - | - | |
| Hepe10g0620 | 445 | Gene3D | Cytochrome P450 | 31 | 445 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | Coils | Coil | 180 | 200 | - | - | |
| Hepe10g0620 | 445 | SUPERFAMILY | Cytochrome P450 | 35 | 444 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g0620 | 445 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 416 | 425 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe07g2298 | Hepe-Chr7:67299842 | Hepe10g0620 | Hepe-Chr10:7700552 | 1.20e-43 | dispersed | |
| Hepe10g0620 | Hepe-Chr10:7700552 | Hepe10g1260 | Hepe-Chr10:48077895 | 3.04e-56 | dispersed | |
| Hepe10g1973 | Hepe-Chr10:56755433 | Hepe10g0620 | Hepe-Chr10:7700552 | 1.39e-95 | transposed | |
| Hepe10g0620 | Hepe-Chr10:7700552 | Hepe04g1544 | Hepe-Chr4:70972275 | 2.06e-107 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe10g0620 | - | - | - | 0.0 |