Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0651 ATGGCGGGAAGAATTGGCGCCATTGTTGGCAACAGACCATTTCTCTCTGCTCTTCCACTATTTAAACATGTTTCACCTTCTTCCAACTCTGCATCAAACCACATTAATTTCAGATTGAATTCTCGTTTCGATCGTTTCTCTCGAGCCCTAAAAATGGCGCAGAATTGCAGCTCAGATGTCAATGAACCGTCGCCCAAGGTCCCAAAGCTTGCTCACGAGAATGGCGAATCTGTAGAATCTTCCAACTTATCGACGCTTCTCAGAGTGAAGAAGCTGTCTGAGAAAGCCGTGCTGCCATCGCGAGCCTCCGCTCTCTCCGCCGGTTACGACCTTTCCAGTGCAACGGAGACGAAGGTACCTGCTCGAGGAAAAGCTCTAGTTCCGACTGATTTGAGCATTGCGATTCCCGGAGGAACTTACGCTCGGATTGCGCCGCGATCGGGCTTGGCTTGGAAGCATGCGATCGATGTTGGTGCGGGTGTGATAGATGCTGATTACAGAGGTGCTGTAGGTGTGATATTGTTCAATCACTCCGATGTTGATTTTGAGGTGAAAGTTGGCGATAGGATCGCGCAACTGATACTCGAGAAGATTGTGACGCCGAAGGTGCTGGAGGTCGAGGATTTGGATTCGACTGCTAGAGGCGAAGGCAGCTTTGGCTCCACGGGTGTTTGA 675 50.37 MAGRIGAIVGNRPFLSALPLFKHVSPSSNSASNHINFRLNSRFDRFSRALKMAQNCSSDVNEPSPKVPKLAHENGESVESSNLSTLLRVKKLSEKAVLPSRASALSAGYDLSSATETKVPARGKALVPTDLSIAIPGGTYARIAPRSGLAWKHAIDVGAGVIDADYRGAVGVILFNHSDVDFEVKVGDRIAQLILEKIVTPKVLEVEDLDSTARGEGSFGSTGV 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8672705 8673763 - Hsped.10g06510.1 Hepe10g0651 581198

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0651 224 NCBIfam dUTP diphosphatase 88 223 IPR008181 GO:0000287(InterPro)|GO:0004170(InterPro)|GO:0006226(InterPro)|GO:0046081(InterPro)
Hepe10g0651 224 MobiDBLite consensus disorder prediction 57 76 - -
Hepe10g0651 224 CDD trimeric_dUTPase 107 195 IPR033704 -
Hepe10g0651 224 PANTHER DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE 64 224 IPR008181 GO:0000287(InterPro)|GO:0000287(PANTHER)|GO:0004170(PANTHER)|GO:0004170(InterPro)|GO:0006226(PANTHER)|GO:0006226(InterPro)|GO:0046081(PANTHER)|GO:0046081(InterPro)
Hepe10g0651 224 SUPERFAMILY dUTPase-like 84 224 IPR036157 -
Hepe10g0651 224 Pfam dUTPase 95 223 IPR029054 -
Hepe10g0651 224 Gene3D - 75 224 IPR036157 -
Hepe10g0651 224 FunFam Deoxyuridine triphosphatase 76 224 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0651 K01520 - - csv:101218654 316.62
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g931 . . . . . . . . Cmo05g00242 . . . . . . . . Bhi04g00255 . . . Hepe10g0651 . . Cla08g01497 Cam08g1987 Cec08g1562 Cco08g1699 Clacu08g1677 . Cre08g1460 . Cone7ag1819 . . . . . Cme03g01965 . . . . . . . . . . . . Cma05g00234 . . . . . . . . . . . . . . . . . . . Csa02g02044 Chy03g01469 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006777 1 1 3 3 1 1 0 1 1 1 1 1 1 1 0 1 1 1 0 1 1 2 1 1 0 1 1 1 0 2 31