Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0690 ATGTTTACCTCCACAAACCATAACATGATCATCCACACCAACACCACGGCGGCTCCGCCATTGCCGGACCTCTCCTTGCAGATTAGTCCACCGTCGGATTCCGGCAGCAGCAGCAGCGATCTCAGCCATGACAATGCTGCTACTGCTACTGCTGGGCTTTTTCTTCCGGCCAAACCCCATTTGGGTTTAGCCGTTGAGCAGCTTGAAAGAAGCTTCAATGGCCGCCATTTTCACAACCACAACCACCACCATCAAACTCAAATCTATGGTCGCCATTTCAAGAGAGGTTCAAAAATGGCGTTTGGGATTAAAAGAAGCATTAGAGCTCCCAGAATGAGATGGACTACCACTCTTCATGCTCATTTTGTCCATGCCGTTCAGCTCCTTGGCGGCCATGAAAGGGCAACACCAAAATCTGTATTGGAGCTGATGAATGTGAAGGATCTAACCCTAGCTCATGTAAAGAGCCATTTACAGATGTATAGAACAGTGAAAAGCACTGACAAAACAACTGATTCAGTGTTGAAGAACCAAAGGCAAGAAGTTGATCCAAGTGGTGTCTCAAATAATTGTGAGATTTCTAACCCACCACTTACAATGTGGAAAAGCCCTGATCAAATGAAGTTGTTCTCTTCATCAATGGAGACAAATCAAGAAATGACGACCAGATGGAATCAACATTGCAAGAACAGTATTGGAAACAACCAGCAGCAGGAGCAGAACCGACACAATGCAAGCATCAAGATCTCGAGTGGTGTGAAGATGCAGAAATTGGAAGGTAGCTGCTTGTCGTTGTGTGATCATCATGCCGATAATTTGTATAATAATAATCTTAACTTAGACTTTACTCTTGGATGCCCAAATTCTCTAACTATGGATTCTAATTCTGAACTTCCCCTTCTCAAATGCTAA 912 44.08 MFTSTNHNMIIHTNTTAAPPLPDLSLQISPPSDSGSSSSDLSHDNAATATAGLFLPAKPHLGLAVEQLERSFNGRHFHNHNHHHQTQIYGRHFKRGSKMAFGIKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKTTDSVLKNQRQEVDPSGVSNNCEISNPPLTMWKSPDQMKLFSSSMETNQEMTTRWNQHCKNSIGNNQQQEQNRHNASIKISSGVKMQKLEGSCLSLCDHHADNLYNNNLNLDFTLGCPNSLTMDSNSELPLLKC 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9119845 9122691 - Hsped.10g06900.1 Hepe10g0690 581237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0690 303 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 289 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
Hepe10g0690 303 MobiDBLite consensus disorder prediction 1 43 - -
Hepe10g0690 303 NCBIfam myb-like DNA-binding domain, SHAQKYF class 110 163 IPR006447 GO:0003677(InterPro)
Hepe10g0690 303 FunFam Myb family transcription factor 108 166 - -
Hepe10g0690 303 Gene3D - 109 166 - -
Hepe10g0690 303 Pfam Myb-like DNA-binding domain 111 162 IPR001005 -
Hepe10g0690 303 SUPERFAMILY Homeodomain-like 107 164 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g0993 Hepe-Chr6:57694093 Hepe10g0690 Hepe-Chr10:9119845 3.43e-34 dispersed
Hepe06g1799 Hepe-Chr6:69069954 Hepe10g0690 Hepe-Chr10:9119845 2.71e-33 dispersed
Hepe07g2334 Hepe-Chr7:67687470 Hepe10g0690 Hepe-Chr10:9119845 9.99e-31 dispersed
Hepe08g0562 Hepe-Chr8:4898102 Hepe10g0690 Hepe-Chr10:9119845 1.46e-18 dispersed
Hepe09g1430 Hepe-Chr9:27131565 Hepe10g0690 Hepe-Chr10:9119845 1.30e-16 dispersed
Hepe01g1720 Hepe-Chr1:82393847 Hepe10g0690 Hepe-Chr10:9119845 5.40e-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56479 PF00249 Myb_DNA-binding 1.20E-05 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0690 - - - 0.0