Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0696 ATGGACATCAGAGAAGCAATCCAAACCCACGGCGACGTCGCCTTGTCCTTCACCAAGCGTCTTCTCCAACACGAAGCCAATTCCTCCAACGTCGTCCTCTCGCCCTTGTCAATCCATCTTCTTCTTAGCCTTATTGCCGCTGCTTCCAAGGGCCCCCCTCTCGATCAGCTTCTCTCCTTCCTTAAATCCAACTCCACCGACAATCTCAACTCCTTCGCTTCTCAAATCGTAGCCACCGTCTTCGCCGATGGCTCCCCCACCGGCGGACCTCGCCTCGCTTTTGCCAATGGAGTTTGGGTTGATCAATCGCTTTCTCTCAAGCCTTCTTTCAAACAGGTTGTCGACACTGTTTATAAAGCCAGGCTCGATCAAGTCGATTTCAAGACTAAGGCTGTTGAAGTAACTTCAGAAGTGAACTCATGGGCTGAAAAAGAGACTAATGGACTTATCACAGAGGTTCTTCCCCCTGGATCAGTTGATAGTCTCTCTAAGCTCATCCTTGCCAATGCACTCTACTTCAAAGGGGCTTGGGAAGAGAAATTTGATGCTTCAAAAACAGAGAAACATGACTTCTTCCTTCTCGATGGGAGTTCGGTTGAGGTGCCCTTTATGACCAGCGAGAAGAAGCAATATATAGCTGCCTTTGACGGATTTAAAGTTCTTGCATTGCCATACAAACAAGGATCCGACCCTCGTCGTTTTTCTATGTACTTCTTCCTCCCAGATGCGAACGATGGATTGTCATCTTTGATAGAAAAAATAGATTCCCAATCCGGGTTCATCGACCGCCACATTCCATATGAAAAACTTAAAGTGGGTGAATTCAAGATTCCCAAGTTTAAAATTTCTTTTGGGGTTGAAGTTTCCAATGTTTTGAAGGGGTTAGGATTGGTGTTACCTTTCTCTGAAGGAGGTTTGTTAGAAATGGTGGACTCGGAAATGGCTGCTCAAAACCTTCATGTTTCAAAAATATTCCATAAGTCATTCATTGAGGTTAATGAAGAAGGCACAGAAGCTGCTGCTGCTACTGCTGCTGTCATAAAATTGAGGGGTTTGCCTTCTGTAGACATAATCGACTTCGTTGCCGACCACCCGTTCTTGTACGTGATCAGGGAAGACAAGACAGGAACTTTGCTTTTCATTGGGCAGGTGCTAAATCCTCTTGTCCTTTGA 1173 45.69 MDIREAIQTHGDVALSFTKRLLQHEANSSNVVLSPLSIHLLLSLIAAASKGPPLDQLLSFLKSNSTDNLNSFASQIVATVFADGSPTGGPRLAFANGVWVDQSLSLKPSFKQVVDTVYKARLDQVDFKTKAVEVTSEVNSWAEKETNGLITEVLPPGSVDSLSKLILANALYFKGAWEEKFDASKTEKHDFFLLDGSSVEVPFMTSEKKQYIAAFDGFKVLALPYKQGSDPRRFSMYFFLPDANDGLSSLIEKIDSQSGFIDRHIPYEKLKVGEFKIPKFKISFGVEVSNVLKGLGLVLPFSEGGLLEMVDSEMAAQNLHVSKIFHKSFIEVNEEGTEAAAATAAVIKLRGLPSVDIIDFVADHPFLYVIREDKTGTLLFIGQVLNPLVL 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9303249 9305030 + Hsped.10g06960.1 Hepe10g0696 581243

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0696 390 FunFam Predicted protein 28 210 - -
Hepe10g0696 390 SUPERFAMILY Serpins 6 387 IPR036186 -
Hepe10g0696 390 FunFam Os11g0230400 protein 177 294 - -
Hepe10g0696 390 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 12 387 IPR000215 GO:0004867(InterPro)|GO:0005615(PANTHER)|GO:0005615(InterPro)
Hepe10g0696 390 Pfam Serpin (serine protease inhibitor) 11 387 IPR023796 -
Hepe10g0696 390 Gene3D Antithrombin, subunit I, domain 2 28 334 IPR042178 -
Hepe10g0696 390 Gene3D - 177 382 IPR042185 -
Hepe10g0696 390 CDD serpinP_plants 12 387 - -
Hepe10g0696 390 ProSitePatterns Serpins signature. 360 370 IPR023795 -
Hepe10g0696 390 SMART serpin2 15 387 IPR023796 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0696 K13963 - - csv:101202809 617.076
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1729 Hepe-Chr1:82458283 Hepe10g0696 Hepe-Chr10:9303249 7.32e-105 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g831 . . . . . . . . Cmo05g00215 . . . . . Sed08g1817 . . Bhi04g00301 Tan02g1904 Cmetu03g1500 . Hepe10g0696 . Lcy13g2026 Cla08g01534 Cam08g2027 Cec08g1603 Cco08g1738 Clacu08g1716 . Cre08g1499 . . Cone17ag1302 . . Csa04g02371 . Cme03g02000 Blo17g00830 . Bda08g01319 . . Bpe05g00068 . . . . . . Cma05g00209 . . Cpe11g00174 . . . . . . . . . . . . . . . Lsi08g01436 Csa02g02005 Chy07g00100 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000825 2 1 6 2 1 2 0 2 2 4 1 2 3 4 4 7 2 3 2 2 4 1 2 5 5 4 4 7 5 1 90