Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0740 ATGGCGAAATCAGCAGAATATGAACATCCACACAAAGCTTTTGGTTGGGCTGCACGAGATCCTTCTGGCTTACTCTCCCCTTTTCATTTCTCTCGAAGGGAAAATCGAGATGATGATGTCAGTATCAAAGTCCTTTACTGTGGGGTTTGCCACTCTGATCTGCATATGCTCAAGAATGATTGGGGTGCCACTGATTATCCTATAGTCCCAGGGCATGAGATTGCTGGTGTTGTGACTTCTGTTGGGAAAAATGTGAAGAAATTCAAAGCAGGGGACGAAGTCGGGGTCGGTGTGATAGTTGGATCTTGTAGAAACTGTGATAATTGTAAACAAGATTTGGAGAGTTACTGCCCCAAGATGATATATACTTACAATTTTCCTGGTATCGATGGATCGAAGAATTACGGTGGTTATTCTGATAAGATCGTCGTCGATCAACATTTTGTTGTTAGATTTCCTAAAAACTTAGCTCTTGATTCTGGGGCTCCTCTTCTATGTGCTGGAATTACAGTTTATAGCCCAATGAAATATTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATCAGTACCTCTCCCAGGAAGAAGGAGGAAGCAATTGATAGGCTCGGTGCCGATGCTTTCGTTGTTTCGAGTGACCCTGAACAATTGAAGGCTGCCATGGGGACGATGGATTACATTATCGACACGGTATCTGCTATCCATGCTCTTGCTCCATTGCTTGGTCTGCTAAAGCTGAATGGAAAGTTGGTCACTGTGGGGTTACCTAACAAGCCACTGGAGCTGCCAGTTGTTTCTCTAGTTCTCGGTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAGGAGACACAAGAGATGTTGGATTTCTGTGGTAAGCACAATATTACAGCAGATATTGAACTCATACAGATGAACGAGATTAACACGGCCATCGAAAGGCTTGAGAAAGCGGATGTTCGATATCGGTTCGTGATCGACATTGGGAACTCCTTGAAATAG 1077 44.29 MAKSAEYEHPHKAFGWAARDPSGLLSPFHFSRRENRDDDVSIKVLYCGVCHSDLHMLKNDWGATDYPIVPGHEIAGVVTSVGKNVKKFKAGDEVGVGVIVGSCRNCDNCKQDLESYCPKMIYTYNFPGIDGSKNYGGYSDKIVVDQHFVVRFPKNLALDSGAPLLCAGITVYSPMKYFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPEQLKAAMGTMDYIIDTVSAIHALAPLLGLLKLNGKLVTVGLPNKPLELPVVSLVLGRRMVGGSNFGGLKETQEMLDFCGKHNITADIELIQMNEINTAIERLEKADVRYRFVIDIGNSLK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11350230 11375887 + Hsped.10g07400.1 Hepe10g0740 581287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0740 358 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Hepe10g0740 358 Pfam Alcohol dehydrogenase GroES-like domain 37 154 IPR013154 -
Hepe10g0740 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 321 IPR036291 -
Hepe10g0740 358 Gene3D - 16 353 - -
Hepe10g0740 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Hepe10g0740 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Hepe10g0740 358 Gene3D - 167 323 - -
Hepe10g0740 358 PANTHER ALDEHYDE REDUCTASE 6 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Hepe10g0740 358 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Hepe10g0740 358 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Hepe10g0740 358 SUPERFAMILY GroES-like 19 185 IPR011032 -
Hepe10g0740 358 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1386 Hepe-Chr4:69519309 Hepe10g0740 Hepe-Chr10:11350230 2.22e-184 dispersed
Hepe06g1407 Hepe-Chr6:64383035 Hepe10g0740 Hepe-Chr10:11350230 4.72e-125 dispersed
Hepe10g0740 Hepe-Chr10:11350230 HepeContig65g0070 Hepe-ChrContig65:6281052 9.44e-18 wgd
Hepe10g0740 Hepe-Chr10:11350230 HepeContig67g0004 Hepe-ChrContig67:510515 6.72e-248 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0740 K00083 - csv:101205228 613.609