Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0809 ATGTCAATCAAAGCCAAAGAAAAAAAACACAATATGGCTTCTTCGAATCCCATATCTCTCCTCACATTCCTCACTCTCCTCTTCCTCTTCTCCTCCCCATCCTCCGCCGTCCCCGTCCCCGCCCCAGCGGTGGATATTTGCCGATCCACAACCTCTCCGGCCTTCTGCAAATCCTTCCTACCCAACACCCCGGGCTCCTCCGTCCACTCCCACGGCCGCTTCACCCTCCGCCACGCCTTCGACCATGCACGCAACTTCCTAGGCCTCATCGACACCCACCTAATCCTCTCCCCCTACATCTCCGCCCTCCACGACTGTCGGTCCCTTGCCGCGGCCAACGTCGACTTCATATCCAACACTATCTTCACAGTCAACACCACCACCGAGGTTCTTTCCTTTTACCAAGCCGATGAGATGGTGTCCTTGCTTAGCGCAGTGATCACCAATGAAGATACTTGTTCCGATGGCTTGGTGGGCTTGGGCTCGGGCTTGGTTAATAAGGTGTTGGAGGCCATCTCATTCGATAGAAAGCTCTACATTTTGTACCTTTCTTTGTTCAAATTGGGTTGGGTTTCTGATAATATGAAGGCTCCTAAGTTGCCAAAGGTGAACCAGTTTGGGCTCGGGAATGGTCCGTTGAAGCTCAAAATGTCACCCAAAGACCGTGCGTATTATGACCGCTTGGTGCATAGGAAGAAGCCAGCGGCTAGAAGGCTTCTTCAGACCAATTCTGAAGATGACGGAATTTTGGTCAATGGTATTGTTGCGGTGGATCAAAATGGAACATACGACTTCACCACCATCAACGCCGCCATTGCGGCAGCTCCAAACAACTCCGCCGCCGCGAAGGGATACTTCTTGATCTTCGTCGCCGCCGGCATTTACAACGAGAGTGTGTTGGTTCCGAAAAACAAAAAGTATGTGATGATGATCGGAGAAGGTAACAACCAAACCATCATCACCGGCAACAACAACGTCGTTGACGGCTCTACCACTTTCAATAGCGCAACCGTCGCTGTGGAGGGAACAGGGTTCTTCGGTGTGAACCTAACGATCACGAACACAGCCGGCGCCATCAAACACCAAGCCGTGGCGCTGCGAGTGAGCGCCGACATGACGACGTTCTACACTTGCATATTCGAAGGCTACCAAGACACTCTATACACCCACTCCCTCCGTCAATTCTACAGAGAGTGCGACATCTATGGAACCGTTGACTTTATCTTCGGCAATGCTGCCGTCGTCCTCCAAAACTGCAACATCTACGCTCGGCTTCCGCTGAGCGGCCAGTTCAATGCCCTCACGGCGCAGGGCCGGACCGACCCGAATCAGAACACTGGCACCTCCATTCACAATTGCACCATCAAGCCGACTCCCGAGCTTGCAGCCAAACCCACCACCAAGAGCTACTTAGGGCGGCCATGGAAGGAATATTCTCGGACAGTTTACATGCAGTCGTTTATCGATGCGTTTATTGACCCTGCGGGGTGGAAGGAGTGGGACGGAACTTTGAATTTGAACACCTCCTATTACGCCGAGTTTAATAACTCAGGGCCGGGATCAGACACTTCGCGGCGGGTTCAATGGGCGGTCGGTGTGATCAACGCCACCGTGGCTAATAACTTCACGGTGTCCAACTTATTGGCCGGAGATCAATGGCTGCCGTTGACCACCGTGCCCTACACCAGCGGTTTGATATCATAA 1704 52.76 MSIKAKEKKHNMASSNPISLLTFLTLLFLFSSPSSAVPVPAPAVDICRSTTSPAFCKSFLPNTPGSSVHSHGRFTLRHAFDHARNFLGLIDTHLILSPYISALHDCRSLAAANVDFISNTIFTVNTTTEVLSFYQADEMVSLLSAVITNEDTCSDGLVGLGSGLVNKVLEAISFDRKLYILYLSLFKLGWVSDNMKAPKLPKVNQFGLGNGPLKLKMSPKDRAYYDRLVHRKKPAARRLLQTNSEDDGILVNGIVAVDQNGTYDFTTINAAIAAAPNNSAAAKGYFLIFVAAGIYNESVLVPKNKKYVMMIGEGNNQTIITGNNNVVDGSTTFNSATVAVEGTGFFGVNLTITNTAGAIKHQAVALRVSADMTTFYTCIFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYARLPLSGQFNALTAQGRTDPNQNTGTSIHNCTIKPTPELAAKPTTKSYLGRPWKEYSRTVYMQSFIDAFIDPAGWKEWDGTLNLNTSYYAEFNNSGPGSDTSRRVQWAVGVINATVANNFTVSNLLAGDQWLPLTTVPYTSGLIS 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16410601 16414268 + Hsped.10g08090.1 Hepe10g0809 581356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0809 567 SMART PMEI_2 39 185 IPR006501 GO:0004857(InterPro)
Hepe10g0809 567 Pfam Pectinesterase 255 551 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Hepe10g0809 567 SUPERFAMILY Pectin lyase-like 251 564 IPR011050 -
Hepe10g0809 567 FunFam Pectinesterase 250 565 - -
Hepe10g0809 567 CDD PMEI-like_3 46 187 - -
Hepe10g0809 567 Pfam Plant invertase/pectin methylesterase inhibitor 45 165 IPR006501 GO:0004857(InterPro)
Hepe10g0809 567 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Hepe10g0809 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 188 IPR035513 -
Hepe10g0809 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 188 IPR035513 -
Hepe10g0809 567 Gene3D - 251 565 IPR012334 -
Hepe10g0809 567 PANTHER PECTINESTERASE 31 555 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2164 Hepe-Chr1:86291753 Hepe10g0809 Hepe-Chr10:16410601 2.92e-191 dispersed
Hepe03g1874 Hepe-Chr3:75735245 Hepe10g0809 Hepe-Chr10:16410601 4.93e-192 dispersed
Hepe10g0628 Hepe-Chr10:7799371 Hepe10g0809 Hepe-Chr10:16410601 2.41e-56 dispersed
Hepe10g0809 Hepe-Chr10:16410601 HepeContig65g0052 Hepe-ChrContig65:5122475 3.74e-90 dispersed
Hepe01g0038 Hepe-Chr1:5517320 Hepe10g0809 Hepe-Chr10:16410601 1.86e-90 wgd
Hepe10g0809 Hepe-Chr10:16410601 Hepe08g1612 Hepe-Chr8:23770000 5.28e-77 wgd
Hepe10g0809 Hepe-Chr10:16410601 HepeContig65g0050 Hepe-ChrContig65:4828376 1.25e-91 wgd
Hepe10g0809 Hepe-Chr10:16410601 HepeContig66g0115 Hepe-ChrContig66:7762778 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0809 K01051 - csv:101216984 816.994