Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0889 ATGTCACAACAAGATTACCACCAGGCAGCGGCGGCGGCGGGCTTCTCCACTGCCCACCAAGACTCTCAACATCAACACTACCACCACAAGGAGAAGCTCCGTCTCCAAGGCTTCGACCCACCACCAACTCCGCCCTCCTTCCTCGGAATTGACCACCACCACCACCACGTCTACGACTCCGCCGGAATTTTGTCCGAAATGTTCAATTTTCCTCCTCAGCCACCGCCACCGCAAACCGACGACTGGTACGGTAACCAGCAAGCGATGAACGCCACGGAGTCGGCGGTGGCCATGCAGCTGTTTCTGATGAACCCAAACCCCCGGTCGCCGTCTCCTCCTCCATGGGGGGTGGTTCCGGAGCAGCAAGATTCAAGCCGTCTTTCGTTGTCATTATCATCTTCCTTAGAAGCTGCAAAAGCTGAGGAATTGAGAATGGGTGACACCGGCAGCGGCTTACTTTACCAACATGTCCACCTTGGAATTGCCTCCTCTAATTCTTCATTCTTCAGAAACTCAAAGTACGTCAAACCTGCACAACAGTTATTGGAGGAGTTTTGTAGCGTTGGAAGAGGTGAGTTTAAGAAAATTAATGATAATTATAAATCAAATCTTCCCTCCAACTCCAACTCAAAGGATCACCAAGCTTTGTCAGCACCTCATAGGATTGAGCATCAAAGGAGGAAGCTCAAATTGTTATCTATGCTTGATGAGGTGGATAGAAGATACAACCATTACTGCGAGCAGATGCAAATGGTGGTGAATTCATTCGACGTGGTGATGGGGTTCGGGTCGGCCGTGCCATACACGGCGTTGGCGCAAAAGGCAATGTCCAGGCATTTTCGATGTCTAAAGGACGCCATATCAGCGCAGCTGAAGCACAGCTGCGAGATGTTGGGGGAGAAAGATGGAGGAGCAGCCGGAAGAGGCACAGGAATAACAAAGGGCGAGACTCCGAGGCTTAAGCTCTTGGAGCAAAGCCTCAGGCAGCAACGAGCCTTCCACCAAATGGGCATCATGGAACAAGAAGCTTGGCGTCCCCAACGCGGTTTGCCCGAACGCTCTGTCAACATCTTGCGTGCCTGGCTCTTCGAGCATTTCCTTCACCCGTACCCTAGTGATGCTGATAAGCATTTGTTGGCTAGGCAGACTGGTTTATCAAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAAGCCAAAGAAGAAGATGACGATGATAATTCCGATGAGGACAGATCAGACCAAATTACCACTAATCACATTATTTCACAAACTCCACCGCCGGCTTCCTCCGCACCCAAAAGACCCACTCATACCACCGAAAACGACCCTTCTTCAGCCTTCTCGCAGAACCCGAAGCATCAACAATATTCCTCCTCCTCCTCCTCTGCCGCCGCCGCAACCCAGCACTGCTTTCCGGCCACCCACTATGACTCAGAACTGCAGGACACGTGTCGGCGTGTCGGCGTTCTCACTGCACCTGACCATCAATTCGGGACCACAACCGCCTCTGCCACGTCTGACATCTCCGGGCCCACCACGCTCATAAGGTTCGGGACCACCGCCGGTGACGTGTCGCTCACACTAGGTTTACGCCACGCCGGAAATATCCCCGATAACAATCCTTCTTTTTCCCTCAGATCCGAGTTTGGAGGCTGTTAG 1707 52.02 MSQQDYHQAAAAAGFSTAHQDSQHQHYHHKEKLRLQGFDPPPTPPSFLGIDHHHHHVYDSAGILSEMFNFPPQPPPPQTDDWYGNQQAMNATESAVAMQLFLMNPNPRSPSPPPWGVVPEQQDSSRLSLSLSSSLEAAKAEELRMGDTGSGLLYQHVHLGIASSNSSFFRNSKYVKPAQQLLEEFCSVGRGEFKKINDNYKSNLPSNSNSKDHQALSAPHRIEHQRRKLKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGFGSAVPYTALAQKAMSRHFRCLKDAISAQLKHSCEMLGEKDGGAAGRGTGITKGETPRLKLLEQSLRQQRAFHQMGIMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQEAKEEDDDDNSDEDRSDQITTNHIISQTPPPASSAPKRPTHTTENDPSSAFSQNPKHQQYSSSSSSAAAATQHCFPATHYDSELQDTCRRVGVLTAPDHQFGTTTASATSDISGPTTLIRFGTTAGDVSLTLGLRHAGNIPDNNPSFSLRSEFGGC 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24538469 24544163 - Hsped.10g08890.1 Hepe10g0889 581436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0889 568 MobiDBLite consensus disorder prediction 1 21 - -
Hepe10g0889 568 MobiDBLite consensus disorder prediction 432 477 - -
Hepe10g0889 568 ProSiteProfiles 'Homeobox' domain profile. 341 404 IPR001356 GO:0003677(InterPro)
Hepe10g0889 568 MobiDBLite consensus disorder prediction 412 477 - -
Hepe10g0889 568 CDD homeodomain 344 405 IPR001356 GO:0003677(InterPro)
Hepe10g0889 568 SMART HOX_1 344 408 IPR001356 GO:0003677(InterPro)
Hepe10g0889 568 Pfam Associated with HOX 170 288 IPR006563 -
Hepe10g0889 568 MobiDBLite consensus disorder prediction 412 426 - -
Hepe10g0889 568 SMART prehox3 163 289 IPR006563 -
Hepe10g0889 568 SUPERFAMILY Homeodomain-like 345 411 IPR009057 -
Hepe10g0889 568 Pfam Homeobox KN domain 361 400 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe10g0889 568 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 103 450 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe10g0889 568 MobiDBLite consensus disorder prediction 1 28 - -
Hepe10g0889 568 Gene3D - 347 409 - -
Hepe10g0889 568 FunFam BEL1-like homeodomain protein 4 347 409 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1188 Hepe-Chr4:67154302 Hepe10g0889 Hepe-Chr10:24538469 1.73e-125 dispersed
Hepe06g1521 Hepe-Chr6:65873042 Hepe10g0889 Hepe-Chr10:24538469 3.15e-88 dispersed
Hepe08g1385 Hepe-Chr8:16277432 Hepe10g0889 Hepe-Chr10:24538469 6.91e-33 dispersed
Hepe10g0889 Hepe-Chr10:24538469 Hepe10g1010 Hepe-Chr10:39999464 1.08e-71 wgd
Hepe10g0889 Hepe-Chr10:24538469 HepeContig66g0009 Hepe-ChrContig66:2695455 2.67e-304 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56493 PF07526 POX 8.00E-47 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0889 - - - 0.0