Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g0889 | ATGTCACAACAAGATTACCACCAGGCAGCGGCGGCGGCGGGCTTCTCCACTGCCCACCAAGACTCTCAACATCAACACTACCACCACAAGGAGAAGCTCCGTCTCCAAGGCTTCGACCCACCACCAACTCCGCCCTCCTTCCTCGGAATTGACCACCACCACCACCACGTCTACGACTCCGCCGGAATTTTGTCCGAAATGTTCAATTTTCCTCCTCAGCCACCGCCACCGCAAACCGACGACTGGTACGGTAACCAGCAAGCGATGAACGCCACGGAGTCGGCGGTGGCCATGCAGCTGTTTCTGATGAACCCAAACCCCCGGTCGCCGTCTCCTCCTCCATGGGGGGTGGTTCCGGAGCAGCAAGATTCAAGCCGTCTTTCGTTGTCATTATCATCTTCCTTAGAAGCTGCAAAAGCTGAGGAATTGAGAATGGGTGACACCGGCAGCGGCTTACTTTACCAACATGTCCACCTTGGAATTGCCTCCTCTAATTCTTCATTCTTCAGAAACTCAAAGTACGTCAAACCTGCACAACAGTTATTGGAGGAGTTTTGTAGCGTTGGAAGAGGTGAGTTTAAGAAAATTAATGATAATTATAAATCAAATCTTCCCTCCAACTCCAACTCAAAGGATCACCAAGCTTTGTCAGCACCTCATAGGATTGAGCATCAAAGGAGGAAGCTCAAATTGTTATCTATGCTTGATGAGGTGGATAGAAGATACAACCATTACTGCGAGCAGATGCAAATGGTGGTGAATTCATTCGACGTGGTGATGGGGTTCGGGTCGGCCGTGCCATACACGGCGTTGGCGCAAAAGGCAATGTCCAGGCATTTTCGATGTCTAAAGGACGCCATATCAGCGCAGCTGAAGCACAGCTGCGAGATGTTGGGGGAGAAAGATGGAGGAGCAGCCGGAAGAGGCACAGGAATAACAAAGGGCGAGACTCCGAGGCTTAAGCTCTTGGAGCAAAGCCTCAGGCAGCAACGAGCCTTCCACCAAATGGGCATCATGGAACAAGAAGCTTGGCGTCCCCAACGCGGTTTGCCCGAACGCTCTGTCAACATCTTGCGTGCCTGGCTCTTCGAGCATTTCCTTCACCCGTACCCTAGTGATGCTGATAAGCATTTGTTGGCTAGGCAGACTGGTTTATCAAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAAGCCAAAGAAGAAGATGACGATGATAATTCCGATGAGGACAGATCAGACCAAATTACCACTAATCACATTATTTCACAAACTCCACCGCCGGCTTCCTCCGCACCCAAAAGACCCACTCATACCACCGAAAACGACCCTTCTTCAGCCTTCTCGCAGAACCCGAAGCATCAACAATATTCCTCCTCCTCCTCCTCTGCCGCCGCCGCAACCCAGCACTGCTTTCCGGCCACCCACTATGACTCAGAACTGCAGGACACGTGTCGGCGTGTCGGCGTTCTCACTGCACCTGACCATCAATTCGGGACCACAACCGCCTCTGCCACGTCTGACATCTCCGGGCCCACCACGCTCATAAGGTTCGGGACCACCGCCGGTGACGTGTCGCTCACACTAGGTTTACGCCACGCCGGAAATATCCCCGATAACAATCCTTCTTTTTCCCTCAGATCCGAGTTTGGAGGCTGTTAG | 1707 | 52.02 | MSQQDYHQAAAAAGFSTAHQDSQHQHYHHKEKLRLQGFDPPPTPPSFLGIDHHHHHVYDSAGILSEMFNFPPQPPPPQTDDWYGNQQAMNATESAVAMQLFLMNPNPRSPSPPPWGVVPEQQDSSRLSLSLSSSLEAAKAEELRMGDTGSGLLYQHVHLGIASSNSSFFRNSKYVKPAQQLLEEFCSVGRGEFKKINDNYKSNLPSNSNSKDHQALSAPHRIEHQRRKLKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGFGSAVPYTALAQKAMSRHFRCLKDAISAQLKHSCEMLGEKDGGAAGRGTGITKGETPRLKLLEQSLRQQRAFHQMGIMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQEAKEEDDDDNSDEDRSDQITTNHIISQTPPPASSAPKRPTHTTENDPSSAFSQNPKHQQYSSSSSSAAAATQHCFPATHYDSELQDTCRRVGVLTAPDHQFGTTTASATSDISGPTTLIRFGTTAGDVSLTLGLRHAGNIPDNNPSFSLRSEFGGC | 568 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 24538469 | 24544163 | - | Hsped.10g08890.1 | Hepe10g0889 | 581436 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g0889 | 568 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Hepe10g0889 | 568 | MobiDBLite | consensus disorder prediction | 432 | 477 | - | - | |
Hepe10g0889 | 568 | ProSiteProfiles | 'Homeobox' domain profile. | 341 | 404 | IPR001356 | GO:0003677(InterPro) | |
Hepe10g0889 | 568 | MobiDBLite | consensus disorder prediction | 412 | 477 | - | - | |
Hepe10g0889 | 568 | CDD | homeodomain | 344 | 405 | IPR001356 | GO:0003677(InterPro) | |
Hepe10g0889 | 568 | SMART | HOX_1 | 344 | 408 | IPR001356 | GO:0003677(InterPro) | |
Hepe10g0889 | 568 | Pfam | Associated with HOX | 170 | 288 | IPR006563 | - | |
Hepe10g0889 | 568 | MobiDBLite | consensus disorder prediction | 412 | 426 | - | - | |
Hepe10g0889 | 568 | SMART | prehox3 | 163 | 289 | IPR006563 | - | |
Hepe10g0889 | 568 | SUPERFAMILY | Homeodomain-like | 345 | 411 | IPR009057 | - | |
Hepe10g0889 | 568 | Pfam | Homeobox KN domain | 361 | 400 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Hepe10g0889 | 568 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 103 | 450 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Hepe10g0889 | 568 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Hepe10g0889 | 568 | Gene3D | - | 347 | 409 | - | - | |
Hepe10g0889 | 568 | FunFam | BEL1-like homeodomain protein 4 | 347 | 409 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1188 | Hepe-Chr4:67154302 | Hepe10g0889 | Hepe-Chr10:24538469 | 1.73e-125 | dispersed | |
Hepe06g1521 | Hepe-Chr6:65873042 | Hepe10g0889 | Hepe-Chr10:24538469 | 3.15e-88 | dispersed | |
Hepe08g1385 | Hepe-Chr8:16277432 | Hepe10g0889 | Hepe-Chr10:24538469 | 6.91e-33 | dispersed | |
Hepe10g0889 | Hepe-Chr10:24538469 | Hepe10g1010 | Hepe-Chr10:39999464 | 1.08e-71 | wgd | |
Hepe10g0889 | Hepe-Chr10:24538469 | HepeContig66g0009 | Hepe-ChrContig66:2695455 | 2.67e-304 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56493 | PF07526 | POX | 8.00E-47 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g0889 | - | - | - | 0.0 |