Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0905 ATGGCCATGGCGATGGCCCATCACAGGGAGAGTGGCGGCGATGGGGGTATCAATGGCCACCTTGACAGCAGTGGGAAGTATGTCCGTTACACGGCGGAGCAAGTGGAGGCGCTTGAGCGAGTGTATGCTGAATGTCCTAAACCAAGCTCTTTGCGCCGCCAGCAGCTGGTTCGTGATTGCCCCATTTTGACTAACATCGAGCCCAAGCAGATCAAAGTCTGGTTCCAGAATCGCAGGTGTAGAGAGAAGCAGAGAAAAGAGTCTTCTCGTTTACAGTCATTGAACTGTAAAATGACGGCTATGAACAAGCTGTTGATGGAGGAGAATGATAGGTTGCAGAAACAAGTGTCTCAGCTTGTATGTGAGAATGGGTATATGAAGCAACATTTACATACTTCTAATGCACCAGCAGCAACAACTAATGATGCAAGTTGTGACTCAGTGGCTACTACTACCCCTCAGCATTCACTTAGAGATGCTAGTAGCCCTGCTGGACTCCTGTCTATTGCAGAGGAGATTTTGGCAGCCTTCCTATCAAAGGCAACGGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTGGGAATCTTCGCCATTTCACAAAGTTGCAGTGGAGTGGCCGCTCGAGCCTGTGGTCTTGTCGGTTTAGAGCCCATGAAGATTGCAGAGATCCTAAAAGATCGTCCATCTTGGTTTCGTGATTGCCGGAGCCTTGAAGTCTTTACAATGTTACCTACTGGTGATGGTGGGACGATCGAACTTGTTTATACGCAGGTTTACGCTCCTACTACATTAGCGCCTGCACGAGATTTTTGGACTCTAAGATACACCAAAACTTTGGAAAATGGCAATCTTGTGGTTTGTGAGAGATCGCTGTCCGGATCTGGCACTGGGCCTAATGCAGCTTCTGCTGCTCAGTTTCTGAGAGCTGAAATGCTTCCCAGTGGCTATTTGATTCGTCCGTGCGAGGGTGGAGGTTCGATTATCCACATTGTAGATCACCTAAATCTTGAGCCTTGGAGTGTACCAGAGGTAGTACGACCACTCTACGAATCGTCAAAGGCTGTTGCCCAGAAAATGACTATAGCAGCTCTTCGCTACGTTAGGCAAATCGCTCAAGAGACAAGTGGTGAAGTTGTATACAGTTTAGGCAGGCAACCTGCTGTTCTTCGAACTTTTAGCCAAAGATTGAGCAGAGGATTTAATGATGCTGTCAATGGATTTAATGATGATGGGTGGTCTCTGATCAATTGTGATGGAGCTGAAGATGTGACTCTTGCCATAAATCCAAGCAAGAATTTAAATACATCATATGATCCAGTTAATTCTCTTGCATTCCATGGAGGGGTCCTTTGTGCTAAGGCTTCCATGCTTCTCCAAAATGTTCCTCCCATTGCTCTAATTCGCTTCTTGAGGGAGCATCGTTCCGAGTGGGCTGATTTCAATGTTGATGCCTATTCCGCCGCATCATTAAAAGCTGGTTCATATGCATATCCGGGCATGAGACCGACTAGGTTTACAGGGAGCCAAATCATCATGCCACTCGGCCATACAATCGAACAAGAAGAGTTGCTTGAAGTTGTAAGGCTTGAAAGCCACCCTCTTGCTCAGGAAGATGCCTTTATGTCCCGGGACGTTCATCTCTTGCAGATGTGTGCTGGAATTGATGAGAATGCTGTTGGGGCGTGTTCCGAACTTGTGTTTGCTCCGATCGATGAGATGTTTCCTGATGATGCTGTGCTGCTGCCTTCTGGTTTCAGGATCATCCCATTACATTCTAAAACAGTTCGAGGTGACCCAAAAGATAAATGGAACTCAAACAGAACTCTGGATCTCACTTCCAGTCTTGAAGTTGGCTCATCTGCTTCTCAAGATGCTGCTGCATCAACATCTAACTTCAGATCGGTTTTGACCATCGCTTTCCAGTTTCCGTTCGGTAGCAACCTGCAGGATGACGTTGCAGCAATGGCGAGGCAGTACGTTCGGAGCGTCGTTTCAGCCGTGCAGAGGGTTGCAGTCGCCATATCGCCCTCTGGATTAAGCTCGCCATCAGAACCGAAGCTGTCATCTGCTTGTCCAGAAGCTCTTACACTGGCTCGATGGATCTGCCATAGCTACAGATGCCATACTGGAACAGAATTAGTGCCATCAGACAGTGTGGATGGTGATTCAGTGTTGAAACATCTATGGAATCATCAGGATGCAATTCTGTGCTGTTCCCTCAAGGTAAAAAAAACACACACAAATGAACATAATAACTGTTTTGCGTGGCTGTGTCCCCTAAGCAATGTGATTTATTTGGTTGGTTGGTTGCAGTCACTGCCCCCAGTCTTCATGTTTGCAAACCAAGCAGGCCTAGACATGTTGGAGACAACCTTAGTTGCCTTACAAGACATCACTTTGGATAAGATTCTTGGCGACTCCGCCCGCAAGGCTTTCTCTGCTGATTTTTCCAACTTAATGCACCAGGGCTTTGCTTACATTCCTGCTGGAATTTGCATGTCCACAATGAGGCGCCATGCTTCCTTTGAACAAGCCATTGCATGGAAAGTCCTTGCAGAAGACGAGTCTACCGTTCACTGTCTCGCCTTTTCCTTTGTCAACTGGTTGTTTCTATGA 2640 47.35 MAMAMAHHRESGGDGGINGHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLVRDCPILTNIEPKQIKVWFQNRRCREKQRKESSRLQSLNCKMTAMNKLLMEENDRLQKQVSQLVCENGYMKQHLHTSNAPAATTNDASCDSVATTTPQHSLRDASSPAGLLSIAEEILAAFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVGLEPMKIAEILKDRPSWFRDCRSLEVFTMLPTGDGGTIELVYTQVYAPTTLAPARDFWTLRYTKTLENGNLVVCERSLSGSGTGPNAASAAQFLRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEPWSVPEVVRPLYESSKAVAQKMTIAALRYVRQIAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLINCDGAEDVTLAINPSKNLNTSYDPVNSLAFHGGVLCAKASMLLQNVPPIALIRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEQEELLEVVRLESHPLAQEDAFMSRDVHLLQMCAGIDENAVGACSELVFAPIDEMFPDDAVLLPSGFRIIPLHSKTVRGDPKDKWNSNRTLDLTSSLEVGSSASQDAAASTSNFRSVLTIAFQFPFGSNLQDDVAAMARQYVRSVVSAVQRVAVAISPSGLSSPSEPKLSSACPEALTLARWICHSYRCHTGTELVPSDSVDGDSVLKHLWNHQDAILCCSLKVKKTHTNEHNNCFAWLCPLSNVIYLVGWLQSLPPVFMFANQAGLDMLETTLVALQDITLDKILGDSARKAFSADFSNLMHQGFAYIPAGICMSTMRRHASFEQAIAWKVLAEDESTVHCLAFSFVNWLFL 879
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29183232 29190199 - Hsped.10g09050.1 Hepe10g0905 581452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0905 879 Coils Coil 102 122 - -
Hepe10g0905 879 Gene3D - 204 385 IPR023393 -
Hepe10g0905 879 Pfam Homeodomain 26 84 IPR001356 GO:0003677(InterPro)
Hepe10g0905 879 SMART START_1 168 378 IPR002913 GO:0008289(InterPro)
Hepe10g0905 879 SMART HOX_1 23 89 IPR001356 GO:0003677(InterPro)
Hepe10g0905 879 ProSiteProfiles START domain profile. 159 387 IPR002913 GO:0008289(InterPro)
Hepe10g0905 879 CDD START_ArGLABRA2_like 163 379 - -
Hepe10g0905 879 SUPERFAMILY Bet v1-like 168 380 - -
Hepe10g0905 879 MobiDBLite consensus disorder prediction 1 20 - -
Hepe10g0905 879 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 21 879 IPR044830 GO:0003700(InterPro)
Hepe10g0905 879 Pfam MEKHLA domain 704 751 IPR013978 -
Hepe10g0905 879 Pfam MEKHLA domain 783 877 IPR013978 -
Hepe10g0905 879 Gene3D - 20 92 - -
Hepe10g0905 879 CDD bZIP 78 117 - -
Hepe10g0905 879 SUPERFAMILY Homeodomain-like 23 87 IPR009057 -
Hepe10g0905 879 Pfam START domain 169 377 IPR002913 GO:0008289(InterPro)
Hepe10g0905 879 FunFam Homeobox-leucine zipper protein REVOLUTA 26 81 - -
Hepe10g0905 879 ProSiteProfiles 'Homeobox' domain profile. 21 85 IPR001356 GO:0003677(InterPro)
Hepe10g0905 879 CDD homeodomain 26 86 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0890 Hepe-Chr8:8076955 Hepe10g0905 Hepe-Chr10:29183232 0.0 transposed
Hepe10g0905 Hepe-Chr10:29183232 HepeContig66g0233 Hepe-ChrContig66:18244698 0.0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56494 PF01852 START 8.70E-48 CL0209 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0905 K09338 - vvi:100243208 1340.1