Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0930 ATGGCGCTCTCTCCATCCCTACAACTCATCCGATTTCATCCTCAAGCACTCTCCACATCCTCTCCCCATCTTCTCTTCTTCCGATCTCCATGGCTTTCCTCTTTCGCTCCGTCTCCGAACTGCAGGATCAAGTTATCTTCAAGGACGACGTGTTTCTCCATGTCCACCGAGGAGGACCAGTGGAGTGAATCAGAACCGTTGGGGGGAGATCGTCAGGATGATATTATTGGCGTTCACCAAGAGAGCTCTGTCGTCACTTCTGCTTCTGCTTCTGCGCAGAGGATTTCTCCCTCCTCATCGTCTCCGAGTGATTATCTCTCGCTTGCGATTCGAGAGACGGTTTATGAGGTGTTAGAGGTTAAGGCCGATGGAACTGTATCCACTAGGAAGATTAACAGACGCCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATCCCTACATTACTGGTCCGTGAACATGCTCTTTTGCTTAATCTGGGTTCGCTACGAGCAATAGCTATGAAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACACAACGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACTTTGGTTGAATTAGGTTCCAGGGCAGGGGCTCTCAGACAAATGCTTCTTGATCTTCTGGAGGATCCACAAGAAATACGTCGTATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATGATGATGTGGAATGCTCTCTTCCTGTGGATAAGCAGATTGCTGAAGAAGAGGAAGAAGAAATAGAAATGCTGCTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGCCAGGCTGAAAGGCTTCTGGATTCTGCAAAAGAAATGGAAGATTCAATTGCCGTCAATTTGAGCTCGCGACGACTAGAGGTTAGCAGAGTGGAATTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGCATGAACTTACGATCATACCTTGAAGAACACGTGCTTGCCTTCTGGTTAACAACCGCTGGGATAATTGTTGGCGGTGTTGTGGCATTCTTTCTCATGTATTCGTATCTCAGAGTTAGGAGAATCCTATAG 1335 45.32 MALSPSLQLIRFHPQALSTSSPHLLFFRSPWLSSFAPSPNCRIKLSSRTTCFSMSTEEDQWSESEPLGGDRQDDIIGVHQESSVVTSASASAQRISPSSSSPSDYLSLAIRETVYEVLEVKADGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSIPTLLVREHALLLNLGSLRAIAMKDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPVDKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVLAFWLTTAGIIVGGVVAFFLMYSYLRVRRIL 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31532282 31546932 + Hsped.10g09300.1 Hepe10g0930 581477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0930 444 Coils Coil 324 344 - -
Hepe10g0930 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 98 443 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Hepe10g0930 444 Pfam Magnesium transporter MRS2-like 120 374 - -
Hepe10g0930 444 CDD Mrs2_Mfm1p-like 117 443 IPR039204 -
Hepe10g0930 444 Gene3D Magnesium transport protein CorA, transmembrane region 194 375 - -
Hepe10g0930 444 FunFam Magnesium transporter MRS2-11, chloroplastic 193 375 - -
Hepe10g0930 444 Gene3D - 107 191 - -
Hepe10g0930 444 FunFam Magnesium transporter MRS2-11, chloroplastic 110 191 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g0930 Hepe-Chr10:31532282 HepeContig66g0203 Hepe-ChrContig66:16858645 2.66e-269 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0930 K16075 - csv:101219314 699.893