Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0936 ATGTCTCGCCGGGGTGGTGGTACTGCCGGCAGCGGTGGCGGTCGTGGTAACGTTTCTGGAGGTCGCGGAGGACAGCCGTCTCCGGCTGTTTATCGCGGCGGCGGCGGTGGCGGTGGCGGTAGAGGTGCCGGAGGAAGGGGTGGTAGAGGCGGCGGAGGGAGAGACGGAGGCCGTGGTGCTCAATATGCTCCTCAACAGATTCCTTCTCCCACTCCCACTCCAACTCCGGTTGCTTCCCGTGCTCCTCCTCAGACGTCAACGGGTGCTTCTTCTTCTTCCTCTTCTGTAACTGCTCCTCCCTCACAGCCAGAGGCCTCTACTTCAACGGTTGCGGCACAGGTCGAGAAGTTAACAATAGCGCCACAGGTAGTTCCGCCGTCGCCGCCGTTTTCAACCAAGGCTTTGACTGTAGCAAAGAGGCCGGGGTTCGGTAAGGTCGGGCAGAGAGTTGTGGTTAGGGCTAACCATTTTTTGGTCCAAGTTGCGGACAAGGAACTCTACCATTACGATGTTTCTATTTCACCGGAGGTTTTATCCAAAAAGGTGTGCCGTGATATAATTCATCAGCTGGTTGAAATGTACAAAGAATCTCATTTAGGTGGGAGAGTTCTAGCATATGATGGTGGAAAGAGTGTTTATGTGGCTGGTCAACTACCATTTTCGTCCAAAGAGTTCATGATTAAATTAGCCCGTAAAGATGAGGTCCAGTCTTCCAAACCAAGAAGAGAACGTGAATTCAAAGTTTCTATCAAATTTGCTTCCAAGCCAGACCTCGATCATCTGCAACAGTTTATAAGAGGACGGCAGCGAGACGCTCCACAAGAAACCATTCAAGTGCTTGATGTTGTTTTGAGAACAACACCGTCTTTCTACTTTACTGTTGTAGGAAGGTCATTTTTCTCCGTTGATTTGGGAGAACCAGGTGAACTTGGTAATGGTGTTGAGTATTGGAGGGGATATTATCAAAGTCTACGGCCTGTACAGATGGGTCTATCTCTGAATATAGATGTGTCAGCTAGATCATTTTATGAACCAATATGTGTTTTAGACTATGTTGCTAAACACTTCAATCTAAGGAATTTCTCAAAGCCAATATCTGATCAGGACTGGAGAAAGGTAAAAAGAGTACTTAATCGTGTGAAGGTGTCATTAAAGTGTAGTGGCAGGTCATACAAAATTACTGGGCTATCAACACAGCCCATAAATAGATTAATGTTTACTCAAGATGATCAGAGAACCCTTTCTGTTGCGCAATACTTTCGTGAAAAATATGATGTTGTGCTACAATTTCCTTCTCTACCTGCTTTACAAGCTGGTAATGATGCAAAACCCATCTATTTGCCTATGGAGGTTTGTACCATTGTTGGTGGGCAGAGATATACGAAGAAATTGAATGAACGCCAAGTAACTGAGATGTTAAGAGCGACTTGTCAGAGACCTAAGGATAGGGAAGACAGTATAAAGGAGACGGTTAAATGGAACAATTATTCTGAAGATGATATTGTTAAGGATTTTGGCATTCAAGTCAACAAAGACTTATGTGATGTCGAAGCTCGAGTTTTGCCACCTCCTTCGCTAAAATATCATGATAAAGGCAGAGAATCAAGAGTTGACCCAAGGATGGGTCAATGGAATATGATTAATAAGAAAATGGTCAATGGTGGTAGACTTGATCATTGGACATGTGTGAACTTCTCTTCACGGTTGGATCAAGGCCTGCCATCTGAATTTTGCCAACAGTTGATGTTCATGTGCAATGACAAAGGAATGGTTTGCAATCCTACTCCGTTGCTTCCAATACGTAATGCACATGCAAACCAACTTGATAGTGCACTTAGAGATATTCATGCTCAGTCTGTGAAGACTTTGGGACCCCAGGGAAAGTCTCTTCAGTTGCTCATAATTATTTTACCTGATGTTACTGGTAGTTCCTACGCGAGGATCAAACGAATATGTGAGACCGAACTTGGAATTGTTTCACAATGTTGCCAGCCTAAGCAGGCTCATAAGCTAAGCAAGCAGTATTTTGAGAATTTGTCCCTCAAAATTAACGTCAAGGTCGGGGGAAGAAACAATGTCCTAACTGATGCTATTCAACGGAAAATTCCACTTGTTACTGATCGACCTACCATTATCTTTGGAGCGGATGTTACACATCCTCAACCTGGAGAAGATTCTAGTGCTTCAATAGCGGCTGTCGTTGCCTCAATGGACTGGCCTGAGGTAACTAAGTATAGAGGAATTGTTTCTGCCCAGACTCATCGTGAAGAAATTATCCAAGATTTGTATAAGAAAATTCAAGATCCTCAAAAAGGGGTGGTGCATTCAGGGATGATTAGGGAGCTTTTCATTGCTTACCGAAGGGCGACGGGCATGAAACCACATAGAATAATATTTTACAGAGATGGTGTAAGTGAAGGACAGTTTTCTCAAGTTTTACTCTATGAGATCGATGCAATCAGGAAGGCATGCGCCTCCCTTGAAGATGGCTACCAACCTCCAGTAACTTTCATAGTAGTGCAAAAGAGGCACCACACCCGTCTTTTTCCGACCAGTCGGGATACTGACCGGAGTGGAAATATTCTTCCAGGTTATTAA 2598 44.5 MSRRGGGTAGSGGGRGNVSGGRGGQPSPAVYRGGGGGGGGRGAGGRGGRGGGGRDGGRGAQYAPQQIPSPTPTPTPVASRAPPQTSTGASSSSSSVTAPPSQPEASTSTVAAQVEKLTIAPQVVPPSPPFSTKALTVAKRPGFGKVGQRVVVRANHFLVQVADKELYHYDVSISPEVLSKKVCRDIIHQLVEMYKESHLGGRVLAYDGGKSVYVAGQLPFSSKEFMIKLARKDEVQSSKPRREREFKVSIKFASKPDLDHLQQFIRGRQRDAPQETIQVLDVVLRTTPSFYFTVVGRSFFSVDLGEPGELGNGVEYWRGYYQSLRPVQMGLSLNIDVSARSFYEPICVLDYVAKHFNLRNFSKPISDQDWRKVKRVLNRVKVSLKCSGRSYKITGLSTQPINRLMFTQDDQRTLSVAQYFREKYDVVLQFPSLPALQAGNDAKPIYLPMEVCTIVGGQRYTKKLNERQVTEMLRATCQRPKDREDSIKETVKWNNYSEDDIVKDFGIQVNKDLCDVEARVLPPPSLKYHDKGRESRVDPRMGQWNMINKKMVNGGRLDHWTCVNFSSRLDQGLPSEFCQQLMFMCNDKGMVCNPTPLLPIRNAHANQLDSALRDIHAQSVKTLGPQGKSLQLLIIILPDVTGSSYARIKRICETELGIVSQCCQPKQAHKLSKQYFENLSLKINVKVGGRNNVLTDAIQRKIPLVTDRPTIIFGADVTHPQPGEDSSASIAAVVASMDWPEVTKYRGIVSAQTHREEIIQDLYKKIQDPQKGVVHSGMIRELFIAYRRATGMKPHRIIFYRDGVSEGQFSQVLLYEIDAIRKACASLEDGYQPPVTFIVVQKRHHTRLFPTSRDTDRSGNILPGY 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31619898 31627283 - Hsped.10g09360.1 Hepe10g0936 581483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0936 865 ProSiteProfiles Piwi domain profile. 632 865 IPR003165 GO:0003676(InterPro)
Hepe10g0936 865 Pfam Argonaute linker 2 domain 482 528 IPR032472 -
Hepe10g0936 865 Pfam Argonaute linker 1 domain 295 344 IPR014811 -
Hepe10g0936 865 SUPERFAMILY PAZ domain 342 497 IPR036085 GO:0005515(InterPro)
Hepe10g0936 865 FunFam Argonaute 10 520 695 - -
Hepe10g0936 865 CDD PAZ_argonaute_like 345 455 - -
Hepe10g0936 865 Pfam Piwi domain 633 865 IPR003165 GO:0003676(InterPro)
Hepe10g0936 865 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 140 864 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Hepe10g0936 865 SUPERFAMILY Ribonuclease H-like 627 864 IPR012337 -
Hepe10g0936 865 SMART DUF1785_2 293 345 IPR014811 -
Hepe10g0936 865 MobiDBLite consensus disorder prediction 1 110 - -
Hepe10g0936 865 MobiDBLite consensus disorder prediction 80 110 - -
Hepe10g0936 865 SMART PAZ_2_a_3 350 478 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Hepe10g0936 865 Pfam N-terminal domain of argonaute 148 284 IPR032474 -
Hepe10g0936 865 ProSiteProfiles PAZ domain profile. 347 456 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Hepe10g0936 865 Gene3D - 520 695 - -
Hepe10g0936 865 Pfam PAZ domain 367 473 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Hepe10g0936 865 SMART Piwi_a_2 632 863 IPR003165 GO:0003676(InterPro)
Hepe10g0936 865 Gene3D - 702 865 IPR036397 GO:0003676(InterPro)
Hepe10g0936 865 Gene3D paz domain 340 460 - -
Hepe10g0936 865 Pfam Mid domain of argonaute 539 616 IPR032473 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0723 Hepe-Chr9:6893068 Hepe10g0936 Hepe-Chr10:31619898 1.66e-273 dispersed
Hepe10g0936 Hepe-Chr10:31619898 Hepe10g1772 Hepe-Chr10:54492401 7.23e-135 dispersed
Hepe10g0936 Hepe-Chr10:31619898 HepeContig66g0202 Hepe-ChrContig66:16832329 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0936 K11593 - csv:116403995 1231.08