Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0970 ATGGGCGTCGTGGACGACGGAGGCACTATTCCGAAGATGGGAGGAGAAAAGCCAAAGGTGGTGGTGATTATGGGGCCGACCGGTTCTGGGAAGTCCCGTCTCGCCATTGATTTGGGTTCTCAATTCCCCGTCGAGATCATCAACGCAGACTCTATGCAGGTTTATCGAGGATTGGACGTTCTCACAAACAAAGTTCCCCTCGAAGATCAAAATGGAATACCGCATCATCTTTTAGGTTCTGTGAGTCCAGACGTTGAATTCACGGCTAAAGACTTTCGAGATTCTGCCATTCCTGTTATTGATGACATAATATCACGCGGGTGCTTGCCAATGATAGTGGGTGGAACGAATTATTATATACAGGCTCTTGTTAGCCCATTTCTTCTGGATGATTCTGCAGAAAACGTTGGTGGAAGTTGCTCCAGTTATCCCGGAGATGAAGAGCTGGGTATTGAGTTGGATGAGGGAAGAGATGGTTTGAAGTATGACTATAACCATCTTAAAGAGATTGATCCAGTTTCGGCTAACAGACTCCATCCTAATAACCACAGAAAAATAAATCAATACCTGAGTTTGTATTACCGCACTGGTGTTCTTCCCAGCACAATTTTTCAAGGAAAGGCTGCCGAGAATTGGGGTCAAGCTGATAGTTTCAGATACGATTGCTGCTTGATATGTGTCGATGCTTCTGTTCCACAACTTGACGGACATGTTGATTCTAGAGTTGATAGCATGGTGGCTGCTGGATTACTTGATGAGGTCTATGACATATACAATCCAAATGCAAACTATACTAGAGGATTGCGTCAAGCTATTGGTGTTCGGGAGTTTGAAGAGTTTTTGAGATATTATGTACCTAAAGGTAGATGCAACAAAGATAGTGATGGGCTTAGTCCAAAAAATTCAATGGAGTGTAAGGAGATTTTGAAAGACAATAGGAGGTCAATCCTAAATTCACCAAGTGATGGCCAATCCTGTTTACTACTGAAAGAAGCCATTGATAATGTAAAGTTGAATACTAGAAGACTGGTTCGTCGTCAGAGGAGGCTGCTAAAGAGACTGGAAACTTTGTTTGAATGGAAGATCCACTATGTTGATTCCACTGAATATATAACATGCAAAATCGAGGATTCATGGACTGCACAAGTCGTTGAACCTGCAGTCCAGATAATTAGGTCTTTCCTAGAAGATAGTTGTTCAGCGACTGAGACAATGAACCCACATAGTTCTGCGCAAACAATCAAAAAGGACTTGTGGACACAATATGTATGCCAGGCTTGTGGGAATAAAGTACTAAGAGGAGCACATGAATGGGAACAACACAATCAAGGTCGAAGCCATCGAAAACGAATGTATCGGCTTAAGAAGAAGTGTGAAGGGCTTTCCTTGCTACAACAGAAACTACTTCAAGAGTAA 1416 42.58 MGVVDDGGTIPKMGGEKPKVVVIMGPTGSGKSRLAIDLGSQFPVEIINADSMQVYRGLDVLTNKVPLEDQNGIPHHLLGSVSPDVEFTAKDFRDSAIPVIDDIISRGCLPMIVGGTNYYIQALVSPFLLDDSAENVGGSCSSYPGDEELGIELDEGRDGLKYDYNHLKEIDPVSANRLHPNNHRKINQYLSLYYRTGVLPSTIFQGKAAENWGQADSFRYDCCLICVDASVPQLDGHVDSRVDSMVAAGLLDEVYDIYNPNANYTRGLRQAIGVREFEEFLRYYVPKGRCNKDSDGLSPKNSMECKEILKDNRRSILNSPSDGQSCLLLKEAIDNVKLNTRRLVRRQRRLLKRLETLFEWKIHYVDSTEYITCKIEDSWTAQVVEPAVQIIRSFLEDSCSATETMNPHSSAQTIKKDLWTQYVCQACGNKVLRGAHEWEQHNQGRSHRKRMYRLKKKCEGLSLLQQKLLQE 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35489023 35512564 - Hsped.10g09700.1 Hepe10g0970 581517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0970 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 126 IPR027417 -
Hepe10g0970 471 Gene3D - 147 207 - -
Hepe10g0970 471 Hamap tRNA dimethylallyltransferase [miaA]. 20 396 IPR018022 GO:0008033(InterPro)|GO:0052381(InterPro)
Hepe10g0970 471 FunFam tRNA dimethylallyltransferase 417 459 - -
Hepe10g0970 471 Pfam IPP transferase 53 352 - -
Hepe10g0970 471 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 20 282 IPR018022 GO:0008033(InterPro)|GO:0052381(InterPro)
Hepe10g0970 471 Gene3D Classic Zinc Finger 421 460 - -
Hepe10g0970 471 Gene3D - 18 420 IPR027417 -
Hepe10g0970 471 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 19 408 IPR039657 GO:0005739(PANTHER)|GO:0006400(PANTHER)|GO:0052381(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0990 Hepe-Chr7:13499454 Hepe10g0970 Hepe-Chr10:35489023 7.92e-21 dispersed
Hepe08g1353 Hepe-Chr8:15668665 Hepe10g0970 Hepe-Chr10:35489023 8.50e-30 dispersed
Hepe02g2701 Hepe-Chr2:74972027 Hepe10g0970 Hepe-Chr10:35489023 9.10e-28 transposed
Hepe03g1981 Hepe-Chr3:76997404 Hepe10g0970 Hepe-Chr10:35489023 1.07e-50 transposed
Hepe10g0970 Hepe-Chr10:35489023 HepeContig66g0165 Hepe-ChrContig66:14567693 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0970 K00791 - csv:101202758 803.897