Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g0981 ATGGGTTTGAGAAATCACATGGCACAAGAAAACATCTTCTGTCTTCAGTCCCCAACTTTCATAGAATGGCTTAAACCACACAACCCTTGTTCTTCTTTCCCCACACCCTCCATTTCTCTCTCTTCTTCGTCTTCGTCTTCCTCCGACCGAGATTTGATCTCTCGGACCGTCCAATGCATTACGGGGTTAATTCCTGGACATGAATTTTTCGTGTCCTCCCCATGCCTGCCTCTGTTCAAGGACACCGAAGTGAAGAAGGAAGAAGAAGGAAGGCAATATTTGGGAATTAAAGAGGAGGATGAAGATATGGAGAAAGTTGAAGTGGGTTTGCACATTGGGCTTCCAAATGTTGGCGGTGTCTCTAACTTGGATGATGGGAACATGAATGTTTGTGTAAAGAAAGAAGAAATTAGCATCGTGAAGAAAAGCTTCTCTAATTTTAACACTCAAGGAAGGTTTTGGATCCCAACGCCGACTCAGATCCTTGTCGGCCCGATGCAATTTTCTTGCTCCATATGCAACAAGTCCTTTAATAGATACAATAACATGCAGATGCACATGTGGGGGCACGGATCGGAGTACCGAAAAGGCCCGGAATCCCTGAGAGGAACACAGCCAGCAGCAATGCTGAGGCTTCCATGTTATTGTTGCGCTCAGGGATGTAAGAACAACATCAACTATCCAAGAGCTAAGCCATTGAAGGACTTCAGAACCCTTCAAACTCACTACAAAAGAAAGCATGGATGTAAGGCATTTATGTGTAGAAAATGTGGGAAAACTCTGGCTGTGAAAGGAGATTGGAGAACCCATGAAAAGAATTGTGGGAAGCTTTGGTATTGCAGCTGTGGCTCAGACTTCAAACACAAACGATCCCTTAAAGATCACATTAGATCCTTTGGCAAAGCCCACTCCCCTCGCTCCCCTCTTGATGCCTTTGAAGATCACAAATTAGAATGCCTCACTGCCTCTGATCAAGAAGATGAGTTCACTCATTAG 996 44.58 MGLRNHMAQENIFCLQSPTFIEWLKPHNPCSSFPTPSISLSSSSSSSSDRDLISRTVQCITGLIPGHEFFVSSPCLPLFKDTEVKKEEEGRQYLGIKEEDEDMEKVEVGLHIGLPNVGGVSNLDDGNMNVCVKKEEISIVKKSFSNFNTQGRFWIPTPTQILVGPMQFSCSICNKSFNRYNNMQMHMWGHGSEYRKGPESLRGTQPAAMLRLPCYCCAQGCKNNINYPRAKPLKDFRTLQTHYKRKHGCKAFMCRKCGKTLAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIRSFGKAHSPRSPLDAFEDHKLECLTASDQEDEFTH 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 36769382 36771139 - Hsped.10g09810.1 Hepe10g0981 581528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g0981 331 Pfam Zinc finger, C2H2 type 168 187 IPR013087 -
Hepe10g0981 331 ProSitePatterns Zinc finger C2H2 type domain signature. 170 190 IPR013087 -
Hepe10g0981 331 ProSiteProfiles Zinc finger C2H2 type domain profile. 168 195 IPR013087 -
Hepe10g0981 331 Pfam BIRD-IDD transcription factor, third C2HC zinc finger 252 275 - -
Hepe10g0981 331 SUPERFAMILY beta-beta-alpha zinc fingers 159 191 IPR036236 -
Hepe10g0981 331 FunFam Zinc finger protein WIP2 221 303 - -
Hepe10g0981 331 ProSiteProfiles Zinc finger C2H2 type domain profile. 272 308 IPR013087 -
Hepe10g0981 331 PANTHER ZINC FINGER PROTEIN WIP2 82 318 IPR043584 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010468(PANTHER)|GO:0010468(InterPro)|GO:0048856(PANTHER)
Hepe10g0981 331 SMART c2h2final6 215 247 IPR013087 -
Hepe10g0981 331 SMART c2h2final6 168 190 IPR013087 -
Hepe10g0981 331 SMART c2h2final6 252 272 IPR013087 -
Hepe10g0981 331 Gene3D Classic Zinc Finger 165 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0113 Hepe-Chr8:959454 Hepe10g0981 Hepe-Chr10:36769382 1.84e-99 dispersed
Hepe10g0981 Hepe-Chr10:36769382 Hepe10g1107 Hepe-Chr10:43772864 6.06e-20 dispersed
Hepe10g0981 Hepe-Chr10:36769382 Hepe04g0308 Hepe-Chr4:48818921 1.65e-104 wgd
Hepe10g0981 Hepe-Chr10:36769382 Hepe04g0273 Hepe-Chr4:46967259 1.65e-104 wgd
Hepe10g0981 Hepe-Chr10:36769382 Hepe09g1585 Hepe-Chr9:43517231 1.37e-18 wgd
Hepe10g0981 Hepe-Chr10:36769382 HepeContig66g0154 Hepe-ChrContig66:13039420 8.69e-241 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56497 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g0981 - - - 0.0