Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1010 ATGGAACATAGTTATGGGTTTGAACAACATGTTGCTCAACAAAGCCGGCGTGATAAGCTAAGATCAGTTCCGCAGAATTATTTGCGAGTTGGGGAATTATCAAGAAACTCTGATGAACAGTTGAGTTTTCACAACTCGGAGCATTCGGGGATCGATCTGGATCTCGTTCGAATTGAAAGTTTTAATAAGAATGCGATTTTGCCTCATGACTTGTCTTTGTTGCCCTCGGAAATGATCAATTTCTCGAGAGATTCCAATATGGTGGACCAAAGGGATATAATGTTGCGCCAAGAATTAGAAAACCCAGCTCAATGCAGTAGGCAAATTGTGGCAGGTGCTTCGTTGGGTTCTTTTTCTAATTCTTTGTTGAAAGCCTCTGGTGAAATTGTAAATAATAGTGGTGGTGATTATTGGAAAAGCTCTCAGCAAAGCTGTGATTGGATGGTGAACTGTGGAAGTAATTCTTTGGGAGGTGAAATGTTGAATGAGGAAGTAACTGATTCTACAGTGTATTCACTGAAGCCAACTTGCATTGGATTCCAAACTTCAACCTCTTTTAACAATCCATCCAACCAGACATTCAATCAGGACGGACAAAAGCGTATAGTAGGAGGAGAATTGCATTTGCATCCAATTTACCAAAATACCCTTCAGGATGTTGTTACATCAGCTTCTATTGGAACTCAGGACCTGGAAATGACATCCATTGTGCAGCATAATTTCACTGAAATTAACCAAACTGCTGCTTGTGAAGGTAGTGGAAATGAGCTTTCTCTTCTTCCAGTGTACAGGGATCAGCCAAATGTGTTGCCTTATGACAGTACTGGTTCTTGGACGGATAGAACTTTCTATAATTGCCGTAGCTGGATTGGTGAATTTGGTTCCATTGCAAGAAAAACTGATGAAGAATTAAGGACTTTCATGAGTGATTCCAATCCACAAGGTCTATCTCTGTCGCTTTCTTCGAATCCGCCGTCTAAATTGCCCACCACACAGTTTGAAGAATCAGAGGAATTACAGGAAAGCATCACTTTGTTAAAAAATCCCCAAGAATCCAAAACAGTCAAGTCTGAGAGTTTGTGTAGATTACCAAAACCAACATCTATTGGTAATAAAAATTATGGGAAATCTCTTCAAGACGTGATGGGGGTTCCTGTGAACACATATAGAAACACAGGTCCTCTTGGTCCCTTTACTGGGTATGCAACCATTTTAAAGAGTTCAAAATTCTTGAAGCCTGCCCAACTGTTGTTAGACGAATTTTGTGGCTCAAATGGGCATAAGTTTCTCCAACCCTGTGAGGTATTTGAGAAGACACCTGGGGAAGTTGGTGTCTCAGCGGCCCTTAATGCATTTAGAAATGAGGTTGTTAACGAAAATAGTTCTTGTGCGGAAGCCTCGACATTCTGCGGTTCGAATGAAACAAATGTTAGTGGAGTTGGGAGCATCTCTTCTGAATCTCATCAACCGGAGTATCAGCAAAAGAAAGCAAGACTTCTATATATGCTAGAGGAGGTTTGCAGAAGATACAAACAATATCACCAGCAAATGCAAATGGTAGTTTCATCCTTTGAATCAGTAGCTGGTCTTAGTTCTGCGACACCCTACATTTCCCTGGCGCTCAAGGCAGTCTCAAGAAACTTCCGGTGTCTTAAGAACGCCATCTCGGAACAACTGAAGTACCTGAGGAAGGTACTTGGTGAGGATTTGTCATCCCCCTCTGCTGGGACAAGCGGCAGCAAAGGCGATGCGAATTCGGCCAGGTTGAAATACATGGAACAGAGCTTCCAAAAGCAAAAATGCGATGTCAATATGGGATTCCTCGAATCCCAACATGTGTGGAGGCCGCAGAGAGGTTTGCCAGAACGTGCTGTGGCAATTCTTAGAGCCTGGCTTTTTGAGCATTTTCTTCACCCGTACCCCACAGACACAGATAAACATATGTTAGCCACTCAAACAGGCCTATCTCGAAACCAGGTGTCGAATTGGTTCATAAATGCCAGAGTGCGGGTGTGGAAGCCGATGGTTGAAGAGATACACATGCTAGAAACCAAGGGCATGGCTGAAATGAACAAAAGTCATGGTACGAAAGATGGAAGTTCTACAATGGAAAACACAGCCGGTTGGACCAGAAGTGAACAACAGCAGCCTCTAAAAAACCATGGTGTTGTAAATGAAATTGCTAATCATCATTTGCAGTGCTTGGGGATGGATTCCTCAAATGGCGATAGAAATCGACTAGGCAGCAGTGACCACCAGTGGGATCAAGACAAACAATCCAAATTGGACAATGGGGTTCAGTCCAACATGGAAGGAGAATTGATGGGGTTCATGCCATATCGGGCCAGCACGGTCGAGGTCGGAGGACTCGGAGCCGTCTCTTTAACATTAGGCCTTCGCCACCGAGTCGAGAGCGCCCGCCATCAACAGCAGCGACACCAATTGCAGCAACAAGATGACCAACTAATACGCCATTATGGAGGCGAAATGATCCATGATTTTGTGGGGTAA 2511 43.61 MEHSYGFEQHVAQQSRRDKLRSVPQNYLRVGELSRNSDEQLSFHNSEHSGIDLDLVRIESFNKNAILPHDLSLLPSEMINFSRDSNMVDQRDIMLRQELENPAQCSRQIVAGASLGSFSNSLLKASGEIVNNSGGDYWKSSQQSCDWMVNCGSNSLGGEMLNEEVTDSTVYSLKPTCIGFQTSTSFNNPSNQTFNQDGQKRIVGGELHLHPIYQNTLQDVVTSASIGTQDLEMTSIVQHNFTEINQTAACEGSGNELSLLPVYRDQPNVLPYDSTGSWTDRTFYNCRSWIGEFGSIARKTDEELRTFMSDSNPQGLSLSLSSNPPSKLPTTQFEESEELQESITLLKNPQESKTVKSESLCRLPKPTSIGNKNYGKSLQDVMGVPVNTYRNTGPLGPFTGYATILKSSKFLKPAQLLLDEFCGSNGHKFLQPCEVFEKTPGEVGVSAALNAFRNEVVNENSSCAEASTFCGSNETNVSGVGSISSESHQPEYQQKKARLLYMLEEVCRRYKQYHQQMQMVVSSFESVAGLSSATPYISLALKAVSRNFRCLKNAISEQLKYLRKVLGEDLSSPSAGTSGSKGDANSARLKYMEQSFQKQKCDVNMGFLESQHVWRPQRGLPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGMAEMNKSHGTKDGSSTMENTAGWTRSEQQQPLKNHGVVNEIANHHLQCLGMDSSNGDRNRLGSSDHQWDQDKQSKLDNGVQSNMEGELMGFMPYRASTVEVGGLGAVSLTLGLRHRVESARHQQQRHQLQQQDDQLIRHYGGEMIHDFVG 836
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 39999464 40004224 - Hsped.10g10100.1 Hepe10g1010 581557
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1010 836 SMART prehox3 399 557 IPR006563 -
Hepe10g1010 836 SUPERFAMILY Homeodomain-like 616 680 IPR009057 -
Hepe10g1010 836 MobiDBLite consensus disorder prediction 309 330 - -
Hepe10g1010 836 SMART HOX_1 614 678 IPR001356 GO:0003677(InterPro)
Hepe10g1010 836 CDD homeodomain 614 675 IPR001356 GO:0003677(InterPro)
Hepe10g1010 836 MobiDBLite consensus disorder prediction 735 764 - -
Hepe10g1010 836 FunFam BEL1-like homeodomain protein 9 617 679 - -
Hepe10g1010 836 Pfam Homeobox KN domain 631 670 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe10g1010 836 MobiDBLite consensus disorder prediction 1 20 - -
Hepe10g1010 836 MobiDBLite consensus disorder prediction 1 17 - -
Hepe10g1010 836 Gene3D - 617 679 - -
Hepe10g1010 836 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 334 710 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe10g1010 836 Pfam Associated with HOX 404 556 IPR006563 -
Hepe10g1010 836 ProSiteProfiles 'Homeobox' domain profile. 611 674 IPR001356 GO:0003677(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0817 Hepe-Chr4:62301640 Hepe10g1010 Hepe-Chr10:39999464 2.20e-68 dispersed
Hepe05g0137 Hepe-Chr5:1651518 Hepe10g1010 Hepe-Chr10:39999464 9.78e-71 dispersed
Hepe10g1010 Hepe-Chr10:39999464 HepeContig66g0009 Hepe-ChrContig66:2695455 1.71e-69 dispersed
Hepe10g0889 Hepe-Chr10:24538469 Hepe10g1010 Hepe-Chr10:39999464 1.08e-71 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56498 PF07526 POX 7.70E-42 No_clan Hepe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1010 - - - 0.0