Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1010 | ATGGAACATAGTTATGGGTTTGAACAACATGTTGCTCAACAAAGCCGGCGTGATAAGCTAAGATCAGTTCCGCAGAATTATTTGCGAGTTGGGGAATTATCAAGAAACTCTGATGAACAGTTGAGTTTTCACAACTCGGAGCATTCGGGGATCGATCTGGATCTCGTTCGAATTGAAAGTTTTAATAAGAATGCGATTTTGCCTCATGACTTGTCTTTGTTGCCCTCGGAAATGATCAATTTCTCGAGAGATTCCAATATGGTGGACCAAAGGGATATAATGTTGCGCCAAGAATTAGAAAACCCAGCTCAATGCAGTAGGCAAATTGTGGCAGGTGCTTCGTTGGGTTCTTTTTCTAATTCTTTGTTGAAAGCCTCTGGTGAAATTGTAAATAATAGTGGTGGTGATTATTGGAAAAGCTCTCAGCAAAGCTGTGATTGGATGGTGAACTGTGGAAGTAATTCTTTGGGAGGTGAAATGTTGAATGAGGAAGTAACTGATTCTACAGTGTATTCACTGAAGCCAACTTGCATTGGATTCCAAACTTCAACCTCTTTTAACAATCCATCCAACCAGACATTCAATCAGGACGGACAAAAGCGTATAGTAGGAGGAGAATTGCATTTGCATCCAATTTACCAAAATACCCTTCAGGATGTTGTTACATCAGCTTCTATTGGAACTCAGGACCTGGAAATGACATCCATTGTGCAGCATAATTTCACTGAAATTAACCAAACTGCTGCTTGTGAAGGTAGTGGAAATGAGCTTTCTCTTCTTCCAGTGTACAGGGATCAGCCAAATGTGTTGCCTTATGACAGTACTGGTTCTTGGACGGATAGAACTTTCTATAATTGCCGTAGCTGGATTGGTGAATTTGGTTCCATTGCAAGAAAAACTGATGAAGAATTAAGGACTTTCATGAGTGATTCCAATCCACAAGGTCTATCTCTGTCGCTTTCTTCGAATCCGCCGTCTAAATTGCCCACCACACAGTTTGAAGAATCAGAGGAATTACAGGAAAGCATCACTTTGTTAAAAAATCCCCAAGAATCCAAAACAGTCAAGTCTGAGAGTTTGTGTAGATTACCAAAACCAACATCTATTGGTAATAAAAATTATGGGAAATCTCTTCAAGACGTGATGGGGGTTCCTGTGAACACATATAGAAACACAGGTCCTCTTGGTCCCTTTACTGGGTATGCAACCATTTTAAAGAGTTCAAAATTCTTGAAGCCTGCCCAACTGTTGTTAGACGAATTTTGTGGCTCAAATGGGCATAAGTTTCTCCAACCCTGTGAGGTATTTGAGAAGACACCTGGGGAAGTTGGTGTCTCAGCGGCCCTTAATGCATTTAGAAATGAGGTTGTTAACGAAAATAGTTCTTGTGCGGAAGCCTCGACATTCTGCGGTTCGAATGAAACAAATGTTAGTGGAGTTGGGAGCATCTCTTCTGAATCTCATCAACCGGAGTATCAGCAAAAGAAAGCAAGACTTCTATATATGCTAGAGGAGGTTTGCAGAAGATACAAACAATATCACCAGCAAATGCAAATGGTAGTTTCATCCTTTGAATCAGTAGCTGGTCTTAGTTCTGCGACACCCTACATTTCCCTGGCGCTCAAGGCAGTCTCAAGAAACTTCCGGTGTCTTAAGAACGCCATCTCGGAACAACTGAAGTACCTGAGGAAGGTACTTGGTGAGGATTTGTCATCCCCCTCTGCTGGGACAAGCGGCAGCAAAGGCGATGCGAATTCGGCCAGGTTGAAATACATGGAACAGAGCTTCCAAAAGCAAAAATGCGATGTCAATATGGGATTCCTCGAATCCCAACATGTGTGGAGGCCGCAGAGAGGTTTGCCAGAACGTGCTGTGGCAATTCTTAGAGCCTGGCTTTTTGAGCATTTTCTTCACCCGTACCCCACAGACACAGATAAACATATGTTAGCCACTCAAACAGGCCTATCTCGAAACCAGGTGTCGAATTGGTTCATAAATGCCAGAGTGCGGGTGTGGAAGCCGATGGTTGAAGAGATACACATGCTAGAAACCAAGGGCATGGCTGAAATGAACAAAAGTCATGGTACGAAAGATGGAAGTTCTACAATGGAAAACACAGCCGGTTGGACCAGAAGTGAACAACAGCAGCCTCTAAAAAACCATGGTGTTGTAAATGAAATTGCTAATCATCATTTGCAGTGCTTGGGGATGGATTCCTCAAATGGCGATAGAAATCGACTAGGCAGCAGTGACCACCAGTGGGATCAAGACAAACAATCCAAATTGGACAATGGGGTTCAGTCCAACATGGAAGGAGAATTGATGGGGTTCATGCCATATCGGGCCAGCACGGTCGAGGTCGGAGGACTCGGAGCCGTCTCTTTAACATTAGGCCTTCGCCACCGAGTCGAGAGCGCCCGCCATCAACAGCAGCGACACCAATTGCAGCAACAAGATGACCAACTAATACGCCATTATGGAGGCGAAATGATCCATGATTTTGTGGGGTAA | 2511 | 43.61 | MEHSYGFEQHVAQQSRRDKLRSVPQNYLRVGELSRNSDEQLSFHNSEHSGIDLDLVRIESFNKNAILPHDLSLLPSEMINFSRDSNMVDQRDIMLRQELENPAQCSRQIVAGASLGSFSNSLLKASGEIVNNSGGDYWKSSQQSCDWMVNCGSNSLGGEMLNEEVTDSTVYSLKPTCIGFQTSTSFNNPSNQTFNQDGQKRIVGGELHLHPIYQNTLQDVVTSASIGTQDLEMTSIVQHNFTEINQTAACEGSGNELSLLPVYRDQPNVLPYDSTGSWTDRTFYNCRSWIGEFGSIARKTDEELRTFMSDSNPQGLSLSLSSNPPSKLPTTQFEESEELQESITLLKNPQESKTVKSESLCRLPKPTSIGNKNYGKSLQDVMGVPVNTYRNTGPLGPFTGYATILKSSKFLKPAQLLLDEFCGSNGHKFLQPCEVFEKTPGEVGVSAALNAFRNEVVNENSSCAEASTFCGSNETNVSGVGSISSESHQPEYQQKKARLLYMLEEVCRRYKQYHQQMQMVVSSFESVAGLSSATPYISLALKAVSRNFRCLKNAISEQLKYLRKVLGEDLSSPSAGTSGSKGDANSARLKYMEQSFQKQKCDVNMGFLESQHVWRPQRGLPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGMAEMNKSHGTKDGSSTMENTAGWTRSEQQQPLKNHGVVNEIANHHLQCLGMDSSNGDRNRLGSSDHQWDQDKQSKLDNGVQSNMEGELMGFMPYRASTVEVGGLGAVSLTLGLRHRVESARHQQQRHQLQQQDDQLIRHYGGEMIHDFVG | 836 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 39999464 | 40004224 | - | Hsped.10g10100.1 | Hepe10g1010 | 581557 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1010 | 836 | SMART | prehox3 | 399 | 557 | IPR006563 | - | |
Hepe10g1010 | 836 | SUPERFAMILY | Homeodomain-like | 616 | 680 | IPR009057 | - | |
Hepe10g1010 | 836 | MobiDBLite | consensus disorder prediction | 309 | 330 | - | - | |
Hepe10g1010 | 836 | SMART | HOX_1 | 614 | 678 | IPR001356 | GO:0003677(InterPro) | |
Hepe10g1010 | 836 | CDD | homeodomain | 614 | 675 | IPR001356 | GO:0003677(InterPro) | |
Hepe10g1010 | 836 | MobiDBLite | consensus disorder prediction | 735 | 764 | - | - | |
Hepe10g1010 | 836 | FunFam | BEL1-like homeodomain protein 9 | 617 | 679 | - | - | |
Hepe10g1010 | 836 | Pfam | Homeobox KN domain | 631 | 670 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Hepe10g1010 | 836 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Hepe10g1010 | 836 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Hepe10g1010 | 836 | Gene3D | - | 617 | 679 | - | - | |
Hepe10g1010 | 836 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 334 | 710 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Hepe10g1010 | 836 | Pfam | Associated with HOX | 404 | 556 | IPR006563 | - | |
Hepe10g1010 | 836 | ProSiteProfiles | 'Homeobox' domain profile. | 611 | 674 | IPR001356 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g0817 | Hepe-Chr4:62301640 | Hepe10g1010 | Hepe-Chr10:39999464 | 2.20e-68 | dispersed | |
Hepe05g0137 | Hepe-Chr5:1651518 | Hepe10g1010 | Hepe-Chr10:39999464 | 9.78e-71 | dispersed | |
Hepe10g1010 | Hepe-Chr10:39999464 | HepeContig66g0009 | Hepe-ChrContig66:2695455 | 1.71e-69 | dispersed | |
Hepe10g0889 | Hepe-Chr10:24538469 | Hepe10g1010 | Hepe-Chr10:39999464 | 1.08e-71 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56498 | PF07526 | POX | 7.70E-42 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1010 | - | - | - | 0.0 |