Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1034 ATGGAGAAATCTGGATACGGTCGCGATGGAATTTTCAGATCCTTACGCCCTCCGCTCGTCTTTCCCAAAGATTCCAATCTCTCGATGGTTTCTTTTCTCTTTCGAAATTCATCGTCTTATCCAAACAGACTCGCCATTGTTGATGCGGAATCCTCTGATTCCGTGTCGTATTCCCAGCTTAAAGCCTCTGCAATTCGGGTCTCCAATGGCTTGCTCCAATTGGGTATCCAGAAAAACGACGTGGTCTTGATTGTTGCCCCGAATTCAATTCAATTCTCCATTTCTTTCATTGGAATTATTGCCATTGGGGCTATTGTTACCACTTGTAATCCTGTCTGCACGCTCTCTGAGCTAACCAAGCAAGTTACAGATGCTAAACCCAAACTTGTGATATCTGTTGCTGAATTGTGGGACAAAGTCAAGGATCTAAACATCCCAACAGTCTTATTAGACCAGCAAATTCCTTCAGCAATACCAATACCCTCTTCGAAAATTTTGCGTTTCATTGATTTGATGAACATGGCTGGTGATAAATCTGGCTCTGAGTTTCCAATTGTTGAGGTGAAACAGAGTGATACAGCTGCACTTCTGTATTCATCAGGAACAACAGGAGCCAGTAAGGGTGTGATTCTGACTCACAGAAACTTCATAACATCTTCACTGATGATAACATTGGATCAGACGTTTATGGGAGAGGAAAATGGTGTATATCTCAACTTTTTGCCAATGTTTCATGTGTTTGGATTGGCTTGTATAACATATGCGCAGCTACAGAAAGGGAATACCATTGTCTCTATGCCAAGGTTTAACCTGGAGAAGGCCCTGTGGGCAGTGGAGAAGTACAAGGTGACAGATCTGTGGGTTGTGCCGCCTGTTGTGCTTGCTTTGGCAAAGCAGAATGTGGTGAAGAAATACGACCTTTCATCCGTGAAGCATGTCGGTTCAGGGGCTGCACCTCTCGGCAAGGAATTGATGGAGGAATGTGCTAATAACATTCCCAGTGCTGTTGTTCTCCAGGGTTATGGTATGACTGAGACTTGTGGAGTTGTTTCTCTGGAGAATCCAGCAGTTGGCAAACGAAATTCCGGTTCAGCTGGAACTCTTGCCTCTGGTGTTGAGGCGCAAATAGTCAGTGTAGATACTTTGAAGCCTCTTCCTCCTAATCAATTTGGAGAGATACGGGTTCGGGGACCAAATATGATGCTTGGTTATTTCAACAATCCACAGGCCACCAAGCAAACTATTGATAAATATGGCTGGGTGCATACTGGAGACCTCGGATACTTTGATGAAAACGGGCAGCTTTATGTTGTCGACCGAATAAAGGAACTCATCAAGTACAAAGGTTTTCAGGTACATTTTTTAAATTGA 1371 43.69 MEKSGYGRDGIFRSLRPPLVFPKDSNLSMVSFLFRNSSSYPNRLAIVDAESSDSVSYSQLKASAIRVSNGLLQLGIQKNDVVLIVAPNSIQFSISFIGIIAIGAIVTTCNPVCTLSELTKQVTDAKPKLVISVAELWDKVKDLNIPTVLLDQQIPSAIPIPSSKILRFIDLMNMAGDKSGSEFPIVEVKQSDTAALLYSSGTTGASKGVILTHRNFITSSLMITLDQTFMGEENGVYLNFLPMFHVFGLACITYAQLQKGNTIVSMPRFNLEKALWAVEKYKVTDLWVVPPVVLALAKQNVVKKYDLSSVKHVGSGAAPLGKELMEECANNIPSAVVLQGYGMTETCGVVSLENPAVGKRNSGSAGTLASGVEAQIVSVDTLKPLPPNQFGEIRVRGPNMMLGYFNNPQATKQTIDKYGWVHTGDLGYFDENGQLYVVDRIKELIKYKGFQVHFLN 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 41075684 41079074 + Hsped.10g10340.1 Hepe10g1034 581581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1034 456 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Hepe10g1034 456 SUPERFAMILY Acetyl-CoA synthetase-like 17 453 - -
Hepe10g1034 456 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 452 - GO:0016405(PANTHER)
Hepe10g1034 456 Pfam AMP-binding enzyme 35 405 IPR000873 -
Hepe10g1034 456 Gene3D - 10 443 IPR042099 -
Hepe10g1034 456 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0275 Hepe-Chr5:3364903 Hepe10g1034 Hepe-Chr10:41075684 1.19e-183 dispersed
Hepe08g1046 Hepe-Chr8:10067732 Hepe10g1034 Hepe-Chr10:41075684 5.60e-18 dispersed
Hepe10g1034 Hepe-Chr10:41075684 Hepe10g1506 Hepe-Chr10:51833254 8.71e-90 dispersed
Hepe10g1034 Hepe-Chr10:41075684 Hepe02g1279 Hepe-Chr2:15978600 3.46e-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1034 K01904 - csv:101220141 768.459