Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1048 ATGTACTCTAATAGTAATGTTGAGGGTTCCCCAGGAAGCTCCATGCATGGAGTGACTGGGAGAGAGCAAACATTTGCATTGTCAGTCCCTTCCCCAATTGTCCCAACTGATAAAACTGCCAAGTTCGATTTACCAGTTGACTCTGAGCATAAGGCCACGGTGTTCAAGCTCTTCTCCTTCGCCAACCCCCACATGAGAACCTTTCACCTTTCTTGGATCTCCTTCTTCACCTGCTTCGTTTCCACCTTCGCCGCCGCCCCTCTCGTCCCCATCATCCGCGACAACCTCAACCTCACCAAAGTCGACATCGGCAACGCTGGAGTCACCTCCGTCTCCGGTAGTATTTTCTCTCGTCTCGTCATGGGCGCCGTTTGCGACCTCTTGGGCCCTCGCTATGGCTGTGCCTTTTTGATCATGCTCGCGGCACCCACCGTGTTTTGCATGTCCTTTGTTTCCTCTGCTGGCGGTTACATAGCGGTTAGATTCATGATTGGATTCTCGCTCGCTACGTTCGTGTCGTGCCAGTACTGGATGAGCACCATGTTCAACAGTAAGATCATTGGGCTTGTGAATGGGACTGCTGCTGGTTGGGGGAATATGGGGGGAGGAGCCACTCAGCTCATTATGCCTTTGTTGTATGATATTATTAAGAGGGCTGGTGCTACTCCTTTCACTGCTTGGAGGATTGCCTTCTTCATCCCTGGTTGGCTTCATATTATTATGGGCATCTTAGTTATGACTCTTGGCCAAGATCTTCCAGATGGCAATCTCAAATGCCTTCAGCAGCAGGGTAATGTTGCAAAAGATAAATTCTCCAAAGTGCTATGGTATGCTGTCACCAATTATAGAACTTGGATCTTTGTCCTCCTCTACGGCTACTCCATGGGGGTTGAACTTTCCACCGATAACGTCGTTGCTGAATATTTCTATGACAGGTTTGATCTAAAGCTGCACACGGCCGGAATTATCGCAGCAACATTCGGCATGGCGAATCTAGTGGCTCGACCCTTCGGAGGGTATGCCTCGGACCTTGCAGCTCGCCATTTCGGGATGAGAGGAAGGCTATGGACCCTGTGGATCCTCCAAACATGCGGGGGATGTTTTTGCATGTGGCTAGGGAAAGCAAACAAGCTTCCAACAGCCATAGCAGCAATGATTCTGTTCTCAATAGGAGCTCAGGCAGCATGTGGAGCTACATTTGGAATCATTCCATTCATTTCTAGGAGGTCATTAGGGATAATATCCGGATTAACAGGAGCAGGAGGGAACTTTGGATCTGGTTTAACTCAATTAGTGTTCTTCTCAACAACCAAATACACAACAGACAGAGGGTTGTTTTTGATGGGAGTAATGATAGTATGTTGTACATTACCAGTCACTTTGGTTCACTTCCCTCAATGGGGAAGCATGTTCTTACCACCAACTAAACACGTTGAGAAAGGTACTGAAGAATTCTATTATGGATCTGAATGGACTGAGGATGAAAAGAAGAACAATTTGCACCATCAAAGTCTCAAGTTTGCTAAGAACAGCATATCTGAACGTGGGAGGCGTGTGGCCTCAGCTCAAACTCCACCAAATACCACTCCTTCTCATGTTTGA 1602 47.69 MYSNSNVEGSPGSSMHGVTGREQTFALSVPSPIVPTDKTAKFDLPVDSEHKATVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVTSVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLAAPTVFCMSFVSSAGGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLLYDIIKRAGATPFTAWRIAFFIPGWLHIIMGILVMTLGQDLPDGNLKCLQQQGNVAKDKFSKVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVVAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDLAARHFGMRGRLWTLWILQTCGGCFCMWLGKANKLPTAIAAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTTKYTTDRGLFLMGVMIVCCTLPVTLVHFPQWGSMFLPPTKHVEKGTEEFYYGSEWTEDEKKNNLHHQSLKFAKNSISERGRRVASAQTPPNTTPSHV 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 41809252 41811090 + Hsped.10g10480.1 Hepe10g1048 581595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1048 533 Gene3D MFS general substrate transporter like domains 60 256 IPR036259 -
Hepe10g1048 533 FunFam High affinity nitrate transporter 60 257 - -
Hepe10g1048 533 SUPERFAMILY MFS general substrate transporter 62 465 IPR036259 -
Hepe10g1048 533 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 518 IPR044772 GO:0005886(PANTHER)|GO:0015112(InterPro)|GO:0015112(PANTHER)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Hepe10g1048 533 CDD MFS_NRT2_like 68 461 IPR044772 GO:0015112(InterPro)
Hepe10g1048 533 MobiDBLite consensus disorder prediction 512 533 - -
Hepe10g1048 533 Pfam Major Facilitator Superfamily 72 428 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe10g1048 533 FunFam Nitrate transporter 2.1 268 469 - -
Hepe10g1048 533 Gene3D MFS general substrate transporter like domains 267 469 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g1048 Hepe-Chr10:41809252 Hepe10g1050 Hepe-Chr10:41904789 0.0 dispersed
Hepe10g1048 Hepe-Chr10:41809252 Hepe10g1049 Hepe-Chr10:41855984 0.0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1048 K02575 - csv:101218244 993.03