Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1050 ATGTCTAATAATGATGTTGGGGGTTCCCCAGGAAGCTCCATGCATGGAGTGACTGGGAGAGAGCAAACATTTGCATTGTCAGTTGCTTCCCCAATTGTCCCAACTGATAAAACTGCCAAGTTCGATTTACCAGTTGACTCTGAGCATAAGGCCACGGTGTTCAAGCTCTTCTCCTTCGCCAACCCCCACATGAGAACCTTTCACCTTTCTTGGATCTCCTTCTTCACCTGCTTCGTTTCCACCTTCGCCGCCGCCCCTCTCGTCCCCATCATCCGCGACAACCTCAACCTCACCAAAGTCGACATTGGCAACGCTGGAGTCGCCTCCGTCTCCGGTAGTATTTTCTCTCGTCTCGTCATGGGCGCCGTTTGCGACCTCTTGGGCCCTCGCTATGGCTGTGCCTTTTTGATCATGCTCGCCGCTCCCACCGTGTTTTGCATGTCCTTTGTTTCCTCTGCTGGCGGTTACATAGCGGTAAGATTCATGATTGGATTCTCGCTCGCTACGTTCGTGTCGTGCCAGTACTGGATGAGCACCATGTTCAACAGTAAGATCATTGGGCTTGTGAATGGGACTGCTGCTGGTTGGGGGAATATGGGGGGAGGAGCCACTCAGCTCATTATGCCTTTGTTGTATGATATTATTAAGAAGGCTGGTGCTACTCCTTTCACTGCTTGGAGGATTGCCTTCTTCATCCCTGGTTGGCTTCATATTATTATGGGCATCCTAGTTATGACCCTTGGCCAAGATCTTCCTGATGGCAATCTCAAAAGCCTTCAGAAGAAGGGTAATGTTGCAAAAGATAAATTCTCCAAAGTGCTATGGTATGCTGTCACCAATTATAGAACTTGGATCTTTGTCCTCCTCTATGGCTACTCCATGGGGGTTGAACTTTCCACTGATAACGTCGTTGCTGAATATTTCTACGACAGGTTTGATCTAAAGCTGCACACGGCCGGAATTATCGCAGCAACATTCGGCATGGCGAATCTAGTGGCTCGACCCTTCGGAGGGTATGCCTCGGACCTTGCAGCTCGCCATTTCGGGATGAGAGGAAGGCTATGGACCCTGTGGATCCTCCAAACATGCGGGGGATGTTTTTGCATGTGGCTAGGGAAAGCAAACAAGCTTCCAACAGCCATAGCAGCAATGATTCTGTTCTCAATAGGAGCTCAGGCAGCATGTGGAGCCACATTTGGAATCGTTCCATTCATTTCGAGGAGGTCATTAGGAATAATATCGGGGTTAACAGGAGCAGGAGGGAATTTTGGATCTGGTTTAACTCAATTAGTGTTCTTCTCAACAACGAAATACACAACAGACAGAGGGCTGTTCTTGATGGGAGTAATGATAGTATGTTGTACTTTACCAGTGACTTTGGTTCACTTCCCTCAATGGGGAAGCATGTTCTTACCACCAACTAAACACGTTGAGAAAGGTACTGAAGAATTCTATTATGGATCTGAATGGACTGAGGATGAAAAGAAGAACAATTTGCACCATCAAAGTCTCAAGTTTGCTGGGAACAGCAGATCTGAACGTGGGAGGCGTGTGGCCTCAGCTTCAACCCCACCGAATACAACTCCTTCCCATGTTTAA 1599 48.09 MSNNDVGGSPGSSMHGVTGREQTFALSVASPIVPTDKTAKFDLPVDSEHKATVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLAAPTVFCMSFVSSAGGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLLYDIIKKAGATPFTAWRIAFFIPGWLHIIMGILVMTLGQDLPDGNLKSLQKKGNVAKDKFSKVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVVAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDLAARHFGMRGRLWTLWILQTCGGCFCMWLGKANKLPTAIAAMILFSIGAQAACGATFGIVPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTTKYTTDRGLFLMGVMIVCCTLPVTLVHFPQWGSMFLPPTKHVEKGTEEFYYGSEWTEDEKKNNLHHQSLKFAGNSRSERGRRVASASTPPNTTPSHV 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 41904789 41906617 - Hsped.10g10500.1 Hepe10g1050 581597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1050 532 Gene3D MFS general substrate transporter like domains 266 468 IPR036259 -
Hepe10g1050 532 MobiDBLite consensus disorder prediction 502 532 - -
Hepe10g1050 532 Gene3D MFS general substrate transporter like domains 59 257 IPR036259 -
Hepe10g1050 532 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 517 IPR044772 GO:0005886(PANTHER)|GO:0015112(InterPro)|GO:0015112(PANTHER)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Hepe10g1050 532 SUPERFAMILY MFS general substrate transporter 61 464 IPR036259 -
Hepe10g1050 532 FunFam High affinity nitrate transporter 59 256 - -
Hepe10g1050 532 MobiDBLite consensus disorder prediction 501 532 - -
Hepe10g1050 532 Pfam Major Facilitator Superfamily 71 427 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe10g1050 532 FunFam Nitrate transporter 2.1 267 468 - -
Hepe10g1050 532 CDD MFS_NRT2_like 67 460 IPR044772 GO:0015112(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g1048 Hepe-Chr10:41809252 Hepe10g1050 Hepe-Chr10:41904789 0.0 dispersed
Hepe10g1050 Hepe-Chr10:41904789 Hepe10g1619 Hepe-Chr10:52905987 9.07e-215 dispersed
Hepe10g1049 Hepe-Chr10:41855984 Hepe10g1050 Hepe-Chr10:41904789 0.0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1050 K02575 - csv:101218244 997.653