Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1059 ATGGGTGCACAAACACCACCCACGACCGCCCATGGCTTCCACCCTCTCCGATTCTCCCTTCAGGTCATCAAAGGCCGCTGGTTCACTGTCTTCGCCACATTTCTCATCATGGCCGGCGCCGGCGCCACCTATCTCTTCGGCGTCTACTCCAAACAGATCAAATCCACCCTCGGGTACGACCAAACCACTCTCAATCTCATGGGTTTTTTCAAAGATCTCGGTGCCAACGTCGGCGTTCTCTCCGGTCTACTGGCGGAGATTACACCCACATGGTTCGTCCTCCTCCTCGGCTCCGCCTTGAACTTCACCGGATACTTCATGATTTGGCTGGCAGTCACCGGCCGAATCGCAAAGCCACAAGTCTGGCAGATGTGTCTTTACATCTGCCTTGGAGCAAATTCCCAAAATTTCGCTAATACGGGCGCTTTGGTCACATGCATCCAGAATTTCCCCGAGAGCCGCGGGGCTATGTTGGGTCTTTTGAAGGGCTTCACAGGGCTGAGCGGCGCCATTCTGACACAGGTTTATTTGGCCGTCTACGGCGAGGATGCGACATCGTTGATCCTTCTAATCGCGTGGCTCCCGGCGGCACTCTCCGTCGTGTTTGTTTTCACGATTCGAAGGCTGAGGGTTGAGAGACATCCAAACGAACAGAGGGTTTTTTACCATTTCCTCTATGTCTCAATTGGGCTAGCGCTTTTCATAATGCTCATGAATATTATCCAGAAAAAAGTCGAATTCAATCACGCCGCTTATTCCGCAAGCGCCGCCGTGATTTGCGTAATTCTTTTCTTTCCTCTGTTAATTGTGTTTAGAGAAGAACTTCATCTCTTGAATGCAAAGAAAAACCCAATTCCCAACGAAACCCCAACACCAAAACCAAAACCAATCGAACCCAAAATTGCGACTGACGAATTGAGGCCAATTCCGGAGTCGTGTTTCTCAAACATATGCGTGAAGCCAGCAAGAGGAGACGATTACACAATCCTCCAAGCACTTCTGAGCATCGACATGTTGGTTCTATTCATCGCAACATTCTGTGGGCTGGGGACAAGCTTAACCGCAGTGGACAATTTGGGGCAAATCGGGGAATCCCTCGGCTACCCAATGAAGACAGTGAAGTCATTCGTATCATTAGTAAGCATATGGAATTACTTCGGCAGAGTATTCTCCGGCTTCGTCTCGGAGGCCCTTTTAGCAAAATTCAAATTCCCAAGGCCATTGATGATGACATTGGTCCTTCTCCTATCATGCATCGGCCAACTCCTAATCGCCTTCCCAGTGCCGGGCTCCGTCTACATCGCATCGATCATAATCGGGTTCTCCTTCGGCGCACAGCTGCCTCTGCTGTTCGCCATCATATCAGAGCTGTTCGGGCTGAAGTATTTCTCGACGTTGTTCAATTGCGGGCAAATAGCGAGCCCGTTGGGGTCGTTCATTCTGAATGTGAAGGTGGCGGGAATGATGTACGACAGTGAGGCTATGAAGCAGCTGAAGGAGAAGGGGCTGGAGAGAGCGGCGGTTAAGGAATTGACTTGCATCGGAAAGCAGTGTTTCAGGAAGTCGTTTACGTTGATGACGATTGTGACGTTTGTTGGGGCTATGGTGTCGCTTGTTTTGGTGATGAGGACGAGGGAGTTTTACAGAGGGGACATTTACAAGAAGTTTAGAGAGGAAGGCAAGGAGGAGGAGACCCATGCTGCTGCTGCTGCTGCTGCTCCTCAATCCAAGTGA 1734 50.46 MGAQTPPTTAHGFHPLRFSLQVIKGRWFTVFATFLIMAGAGATYLFGVYSKQIKSTLGYDQTTLNLMGFFKDLGANVGVLSGLLAEITPTWFVLLLGSALNFTGYFMIWLAVTGRIAKPQVWQMCLYICLGANSQNFANTGALVTCIQNFPESRGAMLGLLKGFTGLSGAILTQVYLAVYGEDATSLILLIAWLPAALSVVFVFTIRRLRVERHPNEQRVFYHFLYVSIGLALFIMLMNIIQKKVEFNHAAYSASAAVICVILFFPLLIVFREELHLLNAKKNPIPNETPTPKPKPIEPKIATDELRPIPESCFSNICVKPARGDDYTILQALLSIDMLVLFIATFCGLGTSLTAVDNLGQIGESLGYPMKTVKSFVSLVSIWNYFGRVFSGFVSEALLAKFKFPRPLMMTLVLLLSCIGQLLIAFPVPGSVYIASIIIGFSFGAQLPLLFAIISELFGLKYFSTLFNCGQIASPLGSFILNVKVAGMMYDSEAMKQLKEKGLERAAVKELTCIGKQCFRKSFTLMTIVTFVGAMVSLVLVMRTREFYRGDIYKKFREEGKEEETHAAAAAAAPQSK 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42266266 42268436 + Hsped.10g10590.1 Hepe10g1059 581606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1059 577 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 557 - GO:0016020(PANTHER)
Hepe10g1059 577 SUPERFAMILY MFS general substrate transporter 27 549 IPR036259 -
Hepe10g1059 577 Pfam Nodulin-like 26 271 IPR010658 -
Hepe10g1059 577 FunFam Nodulin family protein 329 550 - -
Hepe10g1059 577 Gene3D MFS general substrate transporter like domains 333 548 IPR036259 -
Hepe10g1059 577 CDD MFS_Mch1p_like 25 534 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1053 Hepe-Chr1:75235676 Hepe10g1059 Hepe-Chr10:42266266 9.82e-240 dispersed
Hepe02g2925 Hepe-Chr2:78315205 Hepe10g1059 Hepe-Chr10:42266266 5.67e-229 dispersed
Hepe05g0285 Hepe-Chr5:3502717 Hepe10g1059 Hepe-Chr10:42266266 6.50e-227 dispersed
Hepe09g0147 Hepe-Chr9:1185713 Hepe10g1059 Hepe-Chr10:42266266 2.09e-96 dispersed
Hepe09g0148 Hepe-Chr9:1191091 Hepe10g1059 Hepe-Chr10:42266266 5.03e-75 dispersed
Hepe10g1059 Hepe-Chr10:42266266 Hepe10g1070 Hepe-Chr10:42651947 1.46e-220 dispersed
Hepe10g1059 Hepe-Chr10:42266266 Hepe10g1062 Hepe-Chr10:42360757 5.07e-106 proximal
Hepe01g0227 Hepe-Chr1:35181853 Hepe10g1059 Hepe-Chr10:42266266 3.54e-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1059 - - - 0.0